Table 1.
List of dinoflagellate species/strains used in this study and their characteristics regarding production of STX and amplification of sxtA1, sxtA4, and sxtGa
Order and species | Strain | Production of STX (reference or source) | Amplification of: |
sxtG intron length (bp) | |
---|---|---|---|---|---|
sxtA1 and sxtA4 (reference[s] or source) | sxtG (this study) | ||||
Gonyaulacales | |||||
A. affine | CCMP112 | ND (5) | ND (18) | + | 260 |
A. andersoni | CCMP2222 | ND (5) | ND (18) | + | |
A. insuetum | CCMP2082 | ND (5) | ND (this study) | + | No intron |
A. minutum | CCMP113 | + (5) | + (18) | + | 740 |
A. minutum | CS320/01 | + (5) | + (18) | + | 740 |
A. minutum | CS324/16 | + (5) | + (18) | + | 750 |
A. tamarense complex | |||||
A. fundyense (group 1) | CCMP1719 | + (5) | + (18) | + | No intron |
A. tamarense (group 3) | CCMP1771 | ND (5) | + (18) | + | No intron |
A. catenella (group 4) | CCMP1493 | + (5) | + (18) | + | 487 |
A. catenella (group 4) | ACCC01 | + (24) | + (18) | + | 507 |
A. tamarense (group 5) | ATEB01 | + (23) | + (18, 23) | + | 407 |
Ceratium longipes | CCMP1770 | ND (50) | ND | ||
Coolia monotis | CAWD98 | ND (50) | ND | ||
Gambierdiscus australes | CAWD149 | ND (50) | ND | ||
Lingulodinium polyedrum | CCMP1931 | ND (50) | ND | ||
Protoceratium reticulatum | CAWD99 | ND (50) | ND | ||
Pyrocystis noctiluca | CCMP732 | ND (50) | ND | ||
Thecadinium kofoidii | SCCAP K-1504 | ND (50) | ND | ||
Gymnodiniales | |||||
Amphidinium carteri | UIO081 | ND (50) | ND | ||
Amphidinium massartii | CS-259 | ND (18) | ND | ||
Amphidinium mootonorum | CAWD161 | ND (50) | ND | ||
Gymnodinium aureolum | SCCAP K-1561 | ND (50) | ND | ||
Gymnodinium catenatum | CCMP1937 | + (52) | + (18) | + | |
Karlodinium veneficum | RCC2539 | ND (50) | ND | ||
Lepidodinium chlorophorum | RCC2537 | ND (50) | ND | ||
Peridiniales | |||||
Adenoides eludens | CCMP1891 | ND (50) | ND | ||
Azadinium spinosum | RCC2538 | ND (50) | ND | ||
Heterocapsa triquetra | RCC2540 | ND (50) | ND | ||
Pentapharsodinium dalei | SCCAP K-1100 | ND (50) | ND | ||
Scrippsiella trochoideae | BS-46 | ND (50) | ND | ||
Prorocentrales | |||||
Prorocentrum lima | CS-869 | ND (18) | ND | ||
Prorocentrum micans | UIO292 | ND (50) | ND | ||
Prorocentrum minimum | UIO085 | ND (50) | ND | ||
Suessiales | |||||
Polarella glacialis | CCMP2088 | ND (50) | ND |
ND, not detected; +, amplified sequence. The group-naming system of Lilly et al. (2007) is used for A. tamarense complex strains (40).