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. 2013 Apr 9;13:185. doi: 10.1186/1471-2407-13-185

Table 1.

Primers used in this study

Primer name Sequence (5-3) Length (bp)
pGL3 forw
CGGGCGCGGTCGGTAAAGT
380
pGL3 rev
AACAACGGCGGCGGGAAGT
 
p16 forw
GCCACTCTCACCCGACCCGT
130
p16 rev
TCAGCCAGGTCCACGGGCAGA
 
ITGA6 forw
GCCAGCAAGGTGTAGCAGCTA
101
ITGA6 rev
TTGCTCTACACGAACAATCCCTTT
 
SDC1 forw
CCCCGTTTCTGGTGGTCT
175
SDC1 rev
TGTCTGAAGGCTGAGTCCC
 
CD21 forw
GCCGACACGACTACCAACC
150
CD21 rev
AGCAAGTAACCAGATTCACAGC
 
IL8 forw
GAGAGTGATTGAGAGTGGACCAC
111
IL8 rev
CACAACCCTCTGCACCCAGTTT
 
IL6
SABiosciences (PPH00560B)
160
IL12A
SABiosciences (PPH00544B)
82
IFNGR1
SABiosciences (PPH00871B)
112
TNFA1P1
SABiosciences (PPH01176A)
101
GAPDH forw
GGCTCTCCAGAACATCATCC
192
GAPDH rev
GCCTGCTTCACCACCTTC
 
MY09a, b
CGTCCMARRGGAWACTGATC
452
MY11
GCMCAGGGWCATAAYAATGG
 
GP5+
TTTGTTACTGTGGTAGATACTAC
150
GP6+
GAAAAATAAACTGTAAATCATATTC
 
EBV-P23-1
CAGCTCCACGCAAAGTCAGATTG
482
EBV-P23-2
ATCAGAAATTTGCACTTTCTTTGC
 
EBV-P23-3
TTGACATGAGCATGGAAGAC
363
EBV-P23-4
CTCGTGGTCGTGTTCCCTCAC
 
β-actin forw
ATCATGTTTGAGACCTTCAA
320
β-actin rev CATCTCTTGCTCGAAGTCCA  

a M, A+C: R, A+G; W, A+T; Y, C+T;

b degenerate primers targeting the HPV late structural protein L1.