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. Author manuscript; available in PMC: 2013 Apr 12.
Published in final edited form as: Biochemistry. 2012 Feb 27;51(9):1996–2007. doi: 10.1021/bi201799a

Table 1.

Pre-Steady-State Kinetic Parameters of Dpo3

dNTP kp (s−1)1 Kd (mM)1 kp/Kd (μM−1 s−1) Misincorporation Frequency2
Template A
dATP 0.0010 ± 0.0002 0.23 ± 0.02 4.5 × 10−6 6.7 × 10−3
dCTP 0.0016 ± 0.0002 2.0 ± 0.6 7.9 × 10−7 1.2 × 10−3
dGTP 0.0017 ± 0.0004 1.7 ± 1.1 9.6 × 10−7 1.5 × 10−3
dTTP 0.038 ± 0.002 0.057 ± 0.008 6.6 × 10−4
Template C
dATP 0.00065 ± 0.00005 0.74 ± 0.20 8.9 × 10−7 3.0 × 10−4
dCTP3 - - - -
dGTP 0.069 ± 0.005 0.024 ± 0.007 2.9 × 10−3
dTTP 0.0013 ± 0.0001 0.43 ± 0.16 3.1 × 10−6 1.1 × 10−3
Template G
dATP 0.0025 ± 0.0005 1.9 ± 0.9 1.3 × 10−6 1.9 × 10−3
dCTP 0.045 ± 0.008 0.061 ± 0.025 7.4 × 10−4
dGTP4 0.0011 ± 0.0001 0.056 ± 0.017 2.0 × 10−5 2.8 × 10−2
dTTP 0.0016 ± 0.0001 0.30 ± 0.08 5.3 × 10−6 7.6 × 10−3
Template (T)G
dGTP 0.0021 ± 0.0002 0.69 ± 0.20 3.1 × 10−6 4.4 × 10−3
Template T
dATP 0.12 ± 0.01 0.018 ± 0.006 6.8 × 10−3
dCTP 0.0009 ± 0.0001 0.79 ± 0.34 1.1 × 10−6 1.6 × 10−4
dGTP5 0.0025 ± 0.0001 0.41 ± 0.03 6.0 × 10−6 8.7 × 10−4
dTTP 0.0015 ± 0.0001 0.39 ± 0.08 3.7 × 10−6 5.4 × 10−4
1

Calculated from the fit to Equation 4 of the second order plot.

2

Calculated as (kp/Kd)incorrect/(kp/Kd)correct.

3

Was not incorporated appreciably above background and unable to quantify.

4

Inhibition at [dGTP] > 1mM.

5

Inhibition at [dGTP] > 2 mM.