Table 1. Summary of small RNA numbers in the ten libraries.
S_10DAF | S_15DAF | S_21DAF | S_27DAF | S_35DAF | I_10DAF | I_15DAF | I_21DAF | I_27DAF | I_35DAF | |
Number of total clean reads | 14,248,902 | 13,297,350 | 11,378,685 | 11,647,614 | 10,658,388 | 11,630,087 | 11,722,844 | 15,774,443 | 17,702,636 | 13,827,504 |
Number of mapped reads | 12,779,360 | 11,811,091 | 9,941,669 | 9,867,610 | 8,789,166 | 10,621,487 | 10,754,320 | 14,302,943 | 15,851,871 | 12,122,729 |
Reads number of siRNAs with duplex structure | 1,277,501 | 845,336 | 473,392 | 668,230 | 731,697 | 2,129,858 | 1,825,379 | 1,770,892 | 1,641,681 | 784,072 |
Reads number of siRNAs unambiguously mapped | 816,706 | 433,010 | 147,284 | 131,530 | 100,723 | 1,724,709 | 1,483,629 | 1,353,252 | 1,106,900 | 347,937 |
Reads number of 24 nt-siRNAs | 738,515 | 368,377 | 93,525 | 68,383 | 56,503 | 1,650,145 | 1,430,126 | 1,278,948 | 1,056,603 | 288,764 |
Number of unique 24 nt-siRNAs | 84,853 | 65,744 | 26,949 | 23,028 | 18,499 | 78,896 | 88,969 | 91,319 | 102,123 | 48,904 |