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. 2013 Apr 12;8(4):e59883. doi: 10.1371/journal.pone.0059883

Table 7. Table 7. Examples of genes (ORF(j)) regulated by cell size (constitutive expression) .

BCG-Pasteur (H37Rv) Msmeg
gene locus tag§ r(j) value locus tag r(f) value
ORFs involved in DNA replication
parB BCG_0023c (Rv3917c) 0.90 MSMEG_6938 1.25
parA BCG_0024c (Rv3918c) 0.96 MSMEG_6939 0.74
dnaA BCG_0031 (Rv0001) nr MSMEG_6947 0.98
dnaN BCG_0032 (Rv0002) 0.75 MSMEG_0010 0.89
dnaJ1 BCG_0390 (Rv0351) nr MSMEG_4504 0.89
dinX BCG_1589 (Rv1537) 1.06 MSMEG_3172 0.87
dnaE1 BCG_1600 (Rv1547) 0.99 MSMEG_3178 0.91
BCG_2429c (Rv2413c) 1.18 MSMEG_4572 0.82
ssb BCG_2498 (Rv2478c) 1.00 MSMEG_4701 1.05
dnaE2 BCG_3442c (Rv3370c) 1.71 MSMEG_1633 0.95
dnaQ BCG_3771c (Rv3711c) 1.06 MSMEG_6275 1.25
BCG_3781c (Rv3721c) 1.46 MSMEG_6285 0.47
Not in BCG Pasteur (Rv1985c) MSMEG_0548 0.96
ORFs involved in cell wall formation
murA BCG_1376 (Rv1315) 0.89 MSMEC_4932 0.95
murI BCG_1400 (Rv1338) 1.06 MSMEC_4903 1.01
ftsZ BCG_2167c (Rv2150c) 1.00 MSMEG_4222 1.09
ftsK BCG_2498 (Rv2478c) 0.88 MSMEG_2690 0.93
ORFs involved in DNA repair
recF BCG_0033 (Rv0003) 0.89 MSMEG_0003 0.86
recD BCG_0675c (Rv0629c) 1.38 MSMEG_1325 0.83
recB BCG_0677c (Rv0630c) nr MSMEG_1327 1.06
recC BCG_0678c (Rv0631c) 1.43 MSMEG_1328 0.81
BCG_1217 (Rv1156) 0.70 MSMEG_5156 1.05
recN BCG_1734 (Rv1696) 1.38 MSMEG_3749 0.91
BCG_2136 (Rv2119) 1.00 MSMEG_3907 0.93
BCG_2744 (Rv2731) 0.89 MSMEG_2731 1.13
recX BCG_2749c (Rv2736c) 1.15 MSMEG_2724 0.71
recA BCG_2750c (Rv2737c) 0.87 MSMEG_2723 1.18
dinB BCG_3081 (Rv3056) 1.34 MSMEG_2294 1.07
radA BCG_3650 (Rv3585) 1.27 MSMEG_6079 0.80
recQ Not applicable MSMEG_5397 0.85
Other ORFs regulated by cell size
rpoB BCG_0716 (Rv0667) 1.11 MSMEG_1367 1.33
rpoC BCG_0717 (Rv0668) 0.90 MSMEG_1368 0.96
BCG_2228 (Rv2212) 1.22 MSMEG_4279 0.94
nusB BCG_2555c (Rv2533c) 1.14 MSMEG_3036 0.86
nusA BCG_2861c (Rv2841c) 0.93 MSMEG_2625 1.10

, see equation (11) for definition; §, the loci numbers corresponding to M. tuberculosis H37Rv are also indicated between brackets, as it appears in [11]; nr, no result.