Table 2.
Enzyme codes and corresponding gene names related to the carbon fixation pathway in P. haitanensis
| Enzyme codes | Enzyme names | Unigenes |
|---|---|---|
| C3 pathway |
|
49 |
| EC 4.1.1.39 |
Ribulose bisphosphate carboxylase/oxygenase (Rubisco) |
2 |
| EC 2.7.2.3 |
Phosphoglycerate kinase (PGK) |
3 |
| EC 2.1.13/59 |
Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (GAPDH) |
1 |
| EC 5.3.1.1 |
Triose-phosphate isomerase (TIM) |
6 |
| EC 4.1.2.13 |
Fructose-bisphosphate aldolase |
17 |
| EC 3.1.3.11 |
Fructose-1,6-bisphosphatase (FBPase) |
10 |
| EC 2.2.1.1 |
Transketolase |
3 |
| EC 3.1.3.37 |
Sedoheptulose-bisphosphatase (SBPase) |
3 |
| EC 5.3.1.6 |
Ribose-5-phosphate isomerase |
1 |
| EC 5.1.3.1 |
Ribulose-phosphate 3-epimerase |
2 |
| EC 2.7.1.19 |
Phosphoribulokinase |
1 |
| EC 4.1.2.9 |
Phosphoketolase |
0 |
| EC 4.1.2.22 |
Fructose-6-phosphate phosphoketolase |
0 |
| C4 pathway |
|
24 |
| EC 4.1.1.49 |
Phosphoenolpyruvate carboxykinase (PEPCK) |
4 |
| EC 4.1.1.31 |
Phosphoenolpyruvate carboxylase (PEPC) |
1 |
| EC 2.6.1.1 |
Aspartate aminotransferase (AST) |
4 |
| EC 1.1.1.37 |
Malate dehydrogenase (NAD +) (MD) |
3 |
| EC 1.1.1.39 |
Malate dehydrogenase (decarboxylating) (NAD +) (MD) |
3 |
| EC 2.7.1.40 |
Pyruvate kinase |
5 |
| EC 2.6.1.2 |
Alanine aminotransferase (ALT) |
1 |
| EC 1.1.1.40 |
Malic enzyme (ME) |
3 |
| EC 1.1.1.82 |
Malate dehydrogenase (NADP +) |
0 |
| EC 2.7.9.1 |
Pyruvate orthophosphate dikinase |
0 |
| Total | 73 |