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. 2013 Feb 16;14:107. doi: 10.1186/1471-2164-14-107

Table 2.

Enzyme codes and corresponding gene names related to the carbon fixation pathway in P. haitanensis

Enzyme codes Enzyme names Unigenes
C3 pathway
 
49
EC 4.1.1.39
Ribulose bisphosphate carboxylase/oxygenase (Rubisco)
2
EC 2.7.2.3
Phosphoglycerate kinase (PGK)
3
EC 2.1.13/59
Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (GAPDH)
1
EC 5.3.1.1
Triose-phosphate isomerase (TIM)
6
EC 4.1.2.13
Fructose-bisphosphate aldolase
17
EC 3.1.3.11
Fructose-1,6-bisphosphatase (FBPase)
10
EC 2.2.1.1
Transketolase
3
EC 3.1.3.37
Sedoheptulose-bisphosphatase (SBPase)
3
EC 5.3.1.6
Ribose-5-phosphate isomerase
1
EC 5.1.3.1
Ribulose-phosphate 3-epimerase
2
EC 2.7.1.19
Phosphoribulokinase
1
EC 4.1.2.9
Phosphoketolase
0
EC 4.1.2.22
Fructose-6-phosphate phosphoketolase
0
C4 pathway
 
24
EC 4.1.1.49
Phosphoenolpyruvate carboxykinase (PEPCK)
4
EC 4.1.1.31
Phosphoenolpyruvate carboxylase (PEPC)
1
EC 2.6.1.1
Aspartate aminotransferase (AST)
4
EC 1.1.1.37
Malate dehydrogenase (NAD +) (MD)
3
EC 1.1.1.39
Malate dehydrogenase (decarboxylating) (NAD +) (MD)
3
EC 2.7.1.40
Pyruvate kinase
5
EC 2.6.1.2
Alanine aminotransferase (ALT)
1
EC 1.1.1.40
Malic enzyme (ME)
3
EC 1.1.1.82
Malate dehydrogenase (NADP +)
0
EC 2.7.9.1
Pyruvate orthophosphate dikinase
0
Total   73