Skip to main content
. Author manuscript; available in PMC: 2014 Apr 15.
Published in final edited form as: Toxicol Appl Pharmacol. 2013 Feb 4;268(2):132–140. doi: 10.1016/j.taap.2013.01.022

Table 1. Gene Enrichment Analysis.

Gene set enrichment testing of BA gene categories for either up or downregulated gene expression is shown. A statistically enriched gene set is defined as p values ≤ 0.05. The false discovery rate (FDR) q value is the Benjamini and Hochberg adjusted p value.

Downregulation Enrichment Analysis
Gene Category P Value FDR q Value Gene
Set
Size
Bile Acid Transport 0.260 0.260 34
Bile Acid Metabolism 0.040 0.054 26
Bile Acid Receptors and
Transcription Factors
0.012 0.029 21
All Bile Acid Genes 0.015 0.029 81
Upregulation Enrichment Analysis
Bile Acid Transport 0.740 0.988 34
Bile Acid Metabolism 0.960 0.988 26
Bile Acid Receptors and
Transcription Factors
0.988 0.988 21
All Bile Acid Genes 0.985 0.988 81