Table 5.
Haplotypes within HTR3A Associated with Three ND Measures in Pooled Sample
| rs1150226-.... -rs2276302 |
SQ |
HSI |
FTND |
||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8 | 9 | 10 | 11 | 12 | Freq | No. of families | Z score | P haplotype | P global | No. of families | Z score | P haplotype | P global | No. of families | Z score | P haplotype | P global |
| G | C | C | T | A | 0.408 | 182 | 1.823 | 0.068d | 200 | 1.853 | 0.064d | 202 | 2.209 | 0.027d | |||
| A | T | C | A | G | 0.187 | 41 | -1.153 | 0.249r | 42 | -1.008 | 0.314r | 43 | -0.907 | 0.365r | |||
| G | T | C | A | G | 0.142 | 20 | -1.420 | 0.156r | 0.080d | 22 | -1.372 | 0.170r | 0.113a | 180 | 1.631 | 0.103d | 0.049d |
| G | C | C | A | A | 0.075 | 87 | -0.817 | 0.414a | 93 | -1.164 | 0.244a | 99 | -1.262 | 0.207a | |||
| G | C | C | A | G | 0.060 | 73 | 0.572 | 0.568a | 85 | 0.675 | 0.500a | 98 | 0.650 | 0.516a | |||
| rs10160548- .... -rs1176713 |
SQ |
HSI |
FTND |
||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 13 | 14 | 15 | Freq | No. of families | Z score | P haplotype | P global | No. of families | Z score | P haplotype | P global | No. of families | Z score | P haplotype | P global |
| T | G | A | 0.390 | 231 | 1.464 | 0.143a | 0.011a | 199 | 1.386 | 0.166d | 0.028a | 208 | 1.235 | 0.217d | 0.023a |
| G | G | A | 0.318 | 219 | 1.411 | 0.158a | 190 | 2.240 | 0.025a | 201 | 2.244 | 0.025a | |||
| G | A | G | 0.141 | 154 | -0.637 | 0.524a | 106 | -1.313 | 0.189a | 109 | -1.108 | 0.268a | |||
| G | G | G | 0.135 | 22 | -2.377 | 0.017r | 23 | -2.310 | 0.021r | 167 | -2.190 | 0.029a | |||
Notes: 1) Only major haplotypes with a frequency of >5% are shown; those with a P value <0.05 are given in bold. 2) Superscripts indicate genetic model used in the analysis: 3) ND measures were corrected for age, sex, and ethnicity.
additive
dominant
recessive.