Table 2.
Strain | Origin | Sequence at position | Alleles | |||
161 | 265 | 330 | 368 | |||
WC2 | USA | ATC/GTC | GGC/GCC | TTT/TAT | GGC | IGFG, VGFG, IAFG, VAFG, VAYG |
WC6 | USA | ATC | GGC/GCC | TTT | GGC | IGFG, IAFG |
WC97.1 | USA | ATC/GTC | GCC | TAT | GGC | IAYG, VAYG |
NY | USA | GTC/ GCC | GGC/ GCC | TTT/TAT | GGC | AGFG, VAYG |
BHA | USA | ATC | GGC | TTT | GGC | IGFG |
TORREON | Mexico | ATC/GTC | GGC/GCC | TTT/TAT | GGC | IGFG, VGFG, IAYG, VAYG |
GUA | Guadeloupe | GTC | GCC | TAT | GGC | VAYG |
RIC | Costa Rica | ATC/GTC | GGC/GCC | TTT/TAT | GGC | IGFG, IAFG, VGYG, VAFG, VAYG |
CART | Colombia | ATC | GGC | TTT | GCT | IGFA |
MONT | Canada | ATC | GGC/GCC | TTT | GCT | IGFG, IGFA, IAFG |
TBK72 | Australia | GTC | GGC | TTT | GGC | VGFG |
A12 | Australia | ATC | GGC | TTT | GGC | IGFG |
NOTT | U.K. | ATC | GGC | TTT/ TAT | GGC | IGFG, IGYG |
PIERREFEU | France | GTC | GGC | TTT | GCC | VGFA |
CT | France | ATC | GGC | TTT | GGC | IGFG |
NAU | France | ATC | GGC | TTT | GGC | IGFG |
SANC | France | ATC | GCC | TTT | GGC | IAFG |
STEG | France | ATC/GTC | GGC/GCC | TTT/ TAT | GGC | IGFG, VAYG |
GRAM | France | ATC | GGC | TTT | GCC | IGFA |
BEAU | France | GTC | GGC | TTT | GCC | VGFA |
BIZIAT | France | ATC | GGC/GCC | TTT | GGC | IGFG, IAFG |
FLO | Italy | ATC | GCC | TTT | GGC | IAFG |
STIC | Italy | GTC | GCC | TAT | GGC/GCC | VAYG,VAYA |
NORV | Norway | ATC | GGC/GCC | TTT | GGC | IGFG, IAFG |
TUBINGEN | Germany | ATC | GCC | TTT | GGC | IAFG |
BUD | Hungary | GTC | GGC | TTT | GCC | VGFA |
MK | Marocco | ATC/GTC | GGC/GCC | TTT/TAT | GGC | IAFG, IGYG, VAYG |
NIMB | Ivory Coast | ATC | GGC | TTT | GGC | IGFG |
NDL | India | ATC | GGC/GCC | TTT/TAT | GGC | IGFG, IAFG, IAYG, VAYG |
The alleles correspond to the amino-acids found at the four positions 161, 265, 330, 368. Mutations are highlighted by the use of bold font.