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. 2013 Apr 17;8(4):e61061. doi: 10.1371/journal.pone.0061061

Figure 5. Partial dependence plot from the Random Forest (RF) framework showing the relationship between the probability of Bd infection and GI30 (simulated pathogen growth in the 30 days prior to sampling, from the CLIMEX process-based model) for adult male Litoria pearsoniana.

Figure 5

The response line is a lowess smoother. Data were derived from four field sites across three years of sampling (2006–2009). In a model containing the 30 day growth index (GI30), body length (SUL) and Rain (mm on the day of sampling), positive PCR results for Bd infection were correctly predicted in ∼72% of cases (see results).