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. 2013 Apr 17;8(4):e62126. doi: 10.1371/journal.pone.0062126

Table 3. Genotypes and allele frequencies of tested samples in this study.

genotype N (n = 186) Frequency (%) Expected genotype frequency under HWE(%) HapMap frequency HCB (%) Allelea Allele frequency (%) HW (p-value)b
rs4784227 CC 93 50.00 51.52 66.7 C 71.77 0.31
CT 81 43.55 40.52 24.4 T 28.23
TT 12 6.45 7.97 8.9
rs1219648 AA 66 35.48 34.66 40 A 58.87 0.64
AG 87 46.77 48.43 46.7 G 41.13
GG 33 17.74 16.92 13.3
rs3803662 CC 13 6.99 8.59 6.7 C 29.30 0.29
CT 83 44.62 41.43 44.4 T 70.70
TT 90 48.39 49.98 48.9
rs889312 CC 41 22.04 22.64 27.3 C 47.58 0.74
AC 95 51.08 49.88 45.5 A 52.42
AA 50 26.88 27.48 27.3
rs750749 TT 143 76.88 77.74 80 T 88.17 0.26
CT 42 22.58 20.86 17.8 C 11.83
CC 1 0.54 1.40 2.2
rs749292 GG 62 33.33 30.07 8.9 G 54.84 0.07
GA 80 43.01 49.53 55.6 A 45.16
AA 44 23.66 20.40 35.6
a

increased risk allele in bold

b

p value was calculated using chi test