Table 2. Difference of Gene Expression Levels in the HPC and Caudate Putamen (Dorsal Striatum) of WT and Oprd1 −/− Mice.
Hippocampus |
Caudate putamen |
||||||
---|---|---|---|---|---|---|---|
Gene function | RefSeq | Gene title | Protein encoded | median±SEM | p value | median±SEM | p value |
GABA signaling | |||||||
NM_172890 | Slc6a11 | GAT4 | −1.01±0.19 | 0.884 | 1.42±0.15 | 0.031 | |
NM_133661 | Slc6a12 | GAT2 | 1.81±0.10 | 0.000 | 1.12±0.18 | 0.250 | |
Glutamate signaling | |||||||
NM_177407 | Camk2a | CamKIIa | −1.59±0.28 | 0.057 | −1.83±0.27 | 0.000 | |
NM_013540 | Gria2 | GluR2 | 1.13±0.08 | 0.579 | −1.47±0.13 | 0.005 | |
NM_001177656 | Grin1 | GluN1 | −1.83±0.47 | 0.043 | −1.34±0.06 | 0.004 | |
NM_008170 | Grin2a | GluN2A | −1.35±0.12 | 0.016 | −1.10±0.21 | 0.227 | |
NM_008171 | Grin2b | GluN2B | −1.07±0.08 | 0.173 | 1.29±0.14 | 0.026 | |
NM_016976 | Grm1 | mGluR1 | 1.33±0.10 | 0.003 | −1.01±0.04 | 0.977 | |
NM_001013385 | Grm4 | mGluR4 | −1.05±0.13 | 0.535 | 1.27±0.03 | 0.000 | |
NM_182993 | Slc17a7 | VGlut1 | −1.06±0.05 | 0.170 | 1.59±0.25 | 0.041 | |
NM_009200 | Slc1a6 | EAAT4 | −1.35±0.10 | 0.015 | −1.05±0.57 | 0.276 | |
Monoamine signaling | |||||||
NM_009891 | Chat | CHAT | 1.61±0.17 | 0.009 | 1.00±0.24 | 0.506 | |
NM_173740 | Maoa | MAOA | 1.29±0.10 | 0.010 | −1.17±0.08 | 0.008 | |
NM_010484 | Slc6a4 | SERT | 1.13±0.40 | 0.487 | −1.54±0.18 | 0.017 | |
Neuronal markers | |||||||
NM_028755 | Arpp21 | ARPP21 | −1.23±0.12 | 0.011 | −1.30±0.06 | 0.003 | |
NM_021399 | Bcl11b | CTIP2 | −1.42±0.16 | 0.031 | −1.53±0.13 | 0.002 | |
NM_007699 | Chrm4 | M4R | 1.05±0.10 | 0.862 | −1.24±0.05 | 0.001 | |
NM_199058 | Gpr6 | GPR6 | −1.90±0.27 | 0.006 | −1.52±0.11 | 0.002 | |
NM_010471 | Hpca | HPCA | −1.26±0.15 | 0.033 | −1.15±0.09 | 0.048 | |
NM_011866 | Pde10a | PDE10A | −1.40±0.04 | 0.000 | −1.10±0.09 | 0.216 | |
NM_018863 | Pdyn | PDyn | −1.45±0.17 | 0.021 | 1.35±0.14 | 0.050 | |
NM_001002927 | Penk | PEnk | −1.50±0.18 | 0.041 | 1.03±0.15 | 0.490 | |
NM_009311 | Tac1 | Subst P | −1.21±0.29 | 0.008 | −1.37±0.07 | 0.002 |
A total of 67 genes encoding actors of GABA, glutamate or monoamine signaling, and neuronal markers (see Supplementary Table S2), were tested and only genes showing a significant fold-change difference are shown. Data are presented as fold-change Oprd1−/− vs WT mice (median±SEM). Student's t-tests were performed on transformed data (Supplementary Information) to determine whether fold changes differed from 0 (no regulation; corresponds to±1 in table). Significant regulations are highlighted in bold.