Table 1. The number of primers designed from sequences from each of the rice linkage groups and their success rate in amplifying products in all the parental genotypes, bin mapping SNPs and bin mapping individual rice BPs on the seven Lolium/Festuca introgression maps.
| Rice linkage group | Number of primers designed | Number of primers giving amplification products (%) | Number of SNPs mapped (%) | Number of BACs mapped (% total BACs mapped) |
|---|---|---|---|---|
| 1 | 314 | 307 (98) | 87 (28) | 76 (19) |
| 2 | 426 | 398 (94) | 131 (31) | 119 (33) |
| 3 | 603 | 590 (98) | 274 (45) | 221 (68) |
| 4 | 407 | 397 (98) | 156 (38) | 123 (42) |
| 5 | 364 | 357 (98) | 140 (39) | 127 (44) |
| 6 | 377 | 338 (90) | 131 (35) | 109 (39) |
| 7 | 373 | 366 (98) | 155 (42) | 141 (49) |
| 8 | 341 | 331 (97) | 120 (35) | 105 (38) |
| 9 | 296 | 282 (95) | 94 (32) | 83 (37) |
| 10 | 239 | 230 (96) | 63 (26) | 55 (27) |
| 11 | 273 | 264 (97) | 85 (31) | 69 (27) |
| 12 | 320 | 318 (99) | 107 (33) | 79 (29) |
Abbreviations: BACs, bacterial artificial chromosome; SNPs, single-nucleotide polymorphisms. (The numbers shown for rice PM 1 do not include primers and mapped SNPs already published—King et al., 2007).