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. 2013 Apr 12;54(4):2696–2704. doi: 10.1167/iovs.13-11601

Table 2. .

Association Testing of SNPs Located in the COL5A1 Gene Associated in GWAS Discovery Cohort*

SNP
Gene Location
Chromosomal Position
MA
Discovery
Replication, Case–Control
Replication, Family
Meta-Analysis
F_A
F_U
OR
P
F_A
F_U
OR
P
F_A
F_U
OR
P
OR
P
P_A
rs3118516 5′ to COL5A1 136,579,612 A 0.39 0.28 1.37 0.01 0.42 0.36 1.29 0.02 0.36 0.31 1.26 0.23 1.31 3.6E-4 0.02
rs1536482 5′ to COL5A1 136,580,348 A 0.41 0.33 1.32 6.5E-3 0.42 0.36 1.28 0.02 0.37 0.31 1.27 0.20 1.30 1.5E-4 6.5E-3
rs3118520 5′ to COL5A1 136,581,415 G 0.47 0.37 1.31 0.03 0.48 0.41 1.31 0.009 0.44 0.37 1.33 0.11 1.31 2.0E-4 8.6E-3
rs7044529 COL5A1 136,707,872 T 0.17 0.14 1.44 7.4E-3 0.16 0.15 1.02 0.92 0.22 0.12 1.96 0.03 1.39 2.9E-3 0.12
*

P value < 0.05 in replication case–control and family cohorts and by meta-analysis.

Bonferroni-corrected P values.