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. Author manuscript; available in PMC: 2014 Apr 19.
Published in final edited form as: ACS Chem Biol. 2013 Jan 30;8(4):707–715. doi: 10.1021/cb3006243

Table 3.

Spacer structures, maximum lengths, and relative binding affinity (RBA) values of mono- and bivalent OHT ligands (1120).

Entry Ligand Spacer structure Maximum length a [Å] Homo-bivalent ligand (Z-Z/Z isomer) Hetero-bivalent ligand (Z-E/E isomer)
ERα ERβ ERα ERβ
1. 11 EG1 7.24 13.8 ± 4.3 6.11 ± 1.4 6.60 ± 0.5 3.44 ± 0.7
2. 12 EG2 10.8 16.4 ± 2.1 5.55 ± 1.3 23.5 ± 5.2 6.25 ± 0.6
3. 13 EG3 14.4 37.2 ± 2.3 13.9 ± 3.4 8.16 ± 2.0 9.57 ± 1.8
4. 14 EG4 18.0 14.9 ± 4.0 12.2 ± 2.1 13.6 ± 1.3 4.77 ± 1.5
5. 15 EG5 21.6 20.8 ± 5.5 12.8 ± 2.0 10.9 ± 2.3 3.20 ± 1.0
6. 16 EG7 28.8 30.7 ± 2.8 20.7 ± 1.6 32.3 ± 8.1 9.48 ± 1.4
7. 17 EG9 35.9 28.1 ± 3.7 7.92 ± 1.5 23.9 ± 6.9 7.85 ± 2.0
8. 18 b EG10 39.5 17.2 ± 2.0 b 9.53 ± 2.4 b - -
9. 19 EG11 43.1 27.9 ± 4.0 7.17 ± 1.4 18.0 ± 5.0 7.60 ± 2.2
10. 19 b EG11 43.1 21.8 ± 3.1 b 9.75 ± 0.57 b - -
11. 20 monovalent 19.2 c 78.1 ± 12 34.2 ± 1.7 12.4 ± 2.2 8.03 ± 0.01
12. OHT monovalent - 285 d 62 e 5 d -
a

Extended spacer length between two nitrogen atoms measured by using PyMOL.

b

The ER-binding affinities for bivalent OHT ligands 18 and 19 were evaluated based on Z-Z:Z-E:E-E = 1:2:1 isomers according to analytical RP-HPLC analyses.

c

Maximum extended side chain length of EG5Me.

d

Reference 42.

e

Reference 44.