Table 2. List of Reaction Modules Discussed in This Papera.
| RC module | description | length |
|---|---|---|
| RM001 | 2-oxocarboxylic acid chain extension by tricarboxylic acid pathway | 5 |
| RM002 | caboxyl to amino conversion using protective N-acetyl group | 5 |
| RM032 | caboxyl to amino conversion | 3 |
| RM033 | branched chain addition | 4 |
| RM030 | glucosinolate biosynthesis | 5 |
| RM021 | fatty acid synthesis using malonyl-CoA | 4 |
| RM020 | fatty acid synthesis using acetyl-CoA (reversal of beta oxidation) | 4 |
| RM018 | beta oxidation in acyl-CoA degradation | 4 |
| RM003 | methyl to carboxyl conversion on aromatic ring, aerobic | 3 |
| RM004 | dihydroxylation of aromatic ring, type 1 (dioxygenase and dehydrogenase reactions) | 2 |
| RM005 | dihydroxylation of aromatic ring, type 1a (dioxygenase and decarboxylating dehydrogenase reactions) | 2 |
| RM006 | dihydroxylation of aromatic ring, type 2 (two monooxygenase reactions) | 2 |
| RM008 | ortho-cleavage of catechol (beta-ketoadipate pathway) | 4 |
| RM009 | meta-cleavage of catechol | 6 |
| RM010 | dihydroxylation and meta-cleavage of aromatic ring, type 1 | 4 |
| RM015 | oxidation of methyl group on aromatic ring, anaerobic | 6 |
| RM016 | aromatic ring cleavage via beta oxidation, anaerobic | 3 |
| RM025 | conversion of amino acid moiety to carboxyl group | 3 |
| RM022 | nucleotide sugar biosynthesis, type 1 | 3 |
| RM023 | nucleotide sugar biosynthesis, type 2 | 2 |
| RM027 | hydroxylation and methylation motif | 2 |
a
See http://www.kegg.jp/kegg/reaction/rmodule.html for the full list of reaction modules.