Table 1.
Details of the Zonotrichia capensis samples used in this study
| Locality (Locality code)a | Lat./Long. | Sample typeb | Sample IDc | CR | COI | ND2 | 16 s | CHD1Z | MELK | Fib5 |
|---|---|---|---|---|---|---|---|---|---|---|
| NW San Cristóbal, Chiapas, Mexico (1) |
16°45’ N, 92°40’ W |
SS |
AMNH 766634 |
KC693420 |
- |
- |
- |
- |
- |
- |
| Chichicastenango, Quiché, Guatemala (2) |
14°56’ N, 91°07’ W |
SS |
AMNH 397960 |
KC693421 |
- |
- |
- |
- |
- |
- |
| República Dominicana (3) |
19°20’ N, 71°43’ W |
BS |
RD-ZCA |
KC693437 |
- |
- |
- |
- |
- |
- |
| RD-ZCA-2 |
KC693436 |
- |
- |
- |
- |
- |
- |
|||
| RD-ZCA-3 |
KC693439 |
- |
- |
- |
- |
- |
- |
|||
| RD-ZCA-4 |
KC693438 |
- |
- |
- |
- |
- |
- |
|||
| RD-ZCA-5 |
KC693440 |
- |
- |
- |
- |
- |
- |
|||
| La Georgina, San José, Costa Rica (4) |
9°34’ N, 83°44’ W |
MLHS |
LSUMZ B16204 |
KC693418 |
KC693338 |
KC693306 |
KC693272 |
KC693466 |
KC693207 |
KC693240 |
| LSUMZ B16236 |
KC693419 |
KC693339 |
KC693307 |
KC693273 |
KC693467 |
KC693208 |
KC693241 |
|||
| Curaçao (5) |
12°10' N, 69°00' W |
SS |
AMNH 174800 |
KC693428 |
- |
- |
- |
- |
- |
- |
| AMNH 174801 |
KC693429 |
- |
- |
- |
- |
- |
- |
|||
| El Junquito-Colonia Tovar, Aragua, Venezuela (6) |
10°25' N, 67°13’ W |
MLHS |
GFB3125 |
KC693414 |
KC693346 |
KC693314 |
KC693280 |
KC693474 |
KC693215 |
- |
| GFB3126 |
KC693415 |
KC693347 |
KC693315 |
KC693281 |
KC693475 |
KC693216 |
KC693248 |
|||
| GFB3129 |
KC693413 |
KC693348 |
KC693316 |
KC693282 |
KC693476 |
KC693217 |
KC693249 |
|||
| GFB3142 |
KC693417 |
KC693349 |
KC693317 |
KC693283 |
KC693477 |
KC693218 |
KC693250 |
|||
| GFB3162 |
KC693416 |
KC693350 |
KC693318 |
KC693284 |
KC693478 |
KC693219 |
- |
|||
| Laguna de La Herrera, Sabana de Bogotá, Colombia (7) |
4°40’ N, 74°16’ W |
SS |
AMNH 803019 |
KC693430 |
- |
- |
- |
- |
- |
- |
| AMNH 803020 |
KC693431 |
- |
- |
- |
- |
- |
- |
|||
| AMNH 803021 |
KC693432 |
- |
- |
- |
- |
- |
- |
|||
| Summit Mt. Roraima, Roraima, Venezuela (8) |
5°14’ N, 60°47’ W |
SS |
AMNH 237128 |
KC693427 |
- |
- |
- |
- |
- |
- |
| AMNH 237131 |
KC693426 |
- |
- |
- |
- |
- |
- |
|||
| Quito, Pichincha, Ecuador (9) |
0°13’ S, 78°30’ W |
MLHS |
PH-QUITO-2 |
KC693444 |
- |
- |
- |
- |
- |
- |
| PH-QUITO-4 |
KC693441 |
- |
- |
- |
- |
- |
- |
|||
| PH-QUITO-6 |
KC693443 |
- |
- |
- |
- |
- |
- |
|||
| PH-QUITO-7 |
KC693442 |
- |
- |
- |
- |
- |
- |
|||
| Rio Tocantins– Baião, Pará, Brazil (10) |
2°50’ S, 49°36’ W |
SS |
AMNH 431444 |
KC693424 |
- |
- |
- |
- |
- |
- |
| AMNH 431447 |
KC693425 |
- |
- |
- |
- |
- |
- |
|||
| Huánuco-La Unión Rd., Huánuco, Perú (11) |
9°53’ S, 76°32’ W |
MLHS |
LSUMZ B3603 |
KC693412 |
- |
- |
- |
- |
- |
- |
| Cushi, Huánuco, Perú (12) |
9°55’ S, 75°45’ W |
MLHS |
LSUMZ B8084 |
KC693409 |
KC693344 |
KC693312 |
KC693278 |
KC693472 |
KC693213 |
KC693246 |
| LSUMZ B8131 |
KC693410 |
KC693345 |
KC693313 |
KC693279 |
KC693473 |
KC693214 |
KC693247 |
|||
| Oxapampa, Pasco, Perú (13) |
10°34’ S, 75°24’ W |
MLHS |
LSUMZ B1875 |
KC693411 |
KC693342 |
KC693310 |
KC693276 |
KC693470 |
KC693211 |
KC693244 |
| Garanhuns, Pernambuco, Brazil (14) |
8°54’ S, 36°29’ W |
SS |
AMNH 245037 |
KC693422 |
- |
- |
- |
- |
- |
- |
| AMNH 245038 |
KC693423 |
- |
- |
- |
- |
- |
- |
|||
| Chuspipita, La Paz, Bolivia (15) |
16°18’ S, 67°47’ W |
MLHS |
LSUMZ B1277 |
KC693408 |
KC693335 |
KC693303 |
KC693269 |
KC693463 |
KC693204 |
KC693237 |
| Catarata Arco Iris, Santa Cruz, Bolivia (16) |
13°55’ S, 60°45’ W |
MLHS |
LSUMZ B14823 |
KC693406 |
KC693336 |
KC693304 |
KC693270 |
KC693464 |
KC693205 |
KC693238 |
| LSUMZ B14829 |
KC693403 |
KC693337 |
KC693305 |
KC693271 |
KC693465 |
KC693206 |
KC693239 |
|||
| Charagua, Santa Cruz, Bolivia (17) |
19°48’ S, 61°50’ W |
MLHS |
LSUMZ B18743 |
KC693404 |
KC693340 |
KC693308 |
KC693274 |
KC693468 |
KC693209 |
KC693242 |
| LSUMZ B19108 |
KC693407 |
KC693343 |
KC693311 |
KC693277 |
KC693471 |
KC693212 |
KC693245 |
|||
| LSUMZ B18745 |
KC693405 |
KC693341 |
KC693309 |
KC693275 |
KC693469 |
KC693210 |
KC693243 |
|||
| LSUMZ B18751 |
KC693402 |
- |
- |
- |
- |
- |
- |
|||
| Yavi, Jujuy, Argentina (18) |
22°8’ S, 65°28’ W |
BS |
SCL055 |
KC693359 |
- |
- |
- |
- |
- |
- |
| SCL056 |
KC693360 |
- |
- |
- |
- |
- |
- |
|||
| SCL060 |
KC693361 |
- |
- |
- |
- |
- |
- |
|||
| SCL062 |
KC693362 |
- |
- |
- |
- |
- |
- |
|||
| SCL063 |
KC693363 |
KC693322 |
KC693288 |
KC693254 |
KC693448 |
KC693189 |
KC693223 |
|||
| SCL066 |
KC693364 |
- |
- |
- |
- |
- |
- |
|||
| Tres Cruces, Jujuy, Argentina (19) |
22°55’ S, 65°35’ W |
BS |
SCL071 |
KC693365 |
- |
- |
- |
- |
- |
- |
| SCL072 |
KC693366 |
- |
- |
- |
- |
- |
- |
|||
| SCL074 |
KC693367 |
- |
- |
- |
- |
- |
- |
|||
| Iguazú, Misiones, Argentina (20) |
25°34’ S, 54°34’ W |
BS |
SCL505 |
KC693396 |
- |
- |
- |
- |
- |
- |
| Tafí del Valle, Tucumán, Argentina (21) |
26°52’ S, 65°41’ W |
BS |
SCL084 |
KC693368 |
- |
KC693289 |
KC693255 |
KC693449 |
KC693190 |
KC693224 |
| SCL085 |
KC693369 |
- |
- |
- |
- |
- |
- |
|||
| SCL086 |
KC693370 |
- |
- |
- |
- |
- |
- |
|||
| SCL088 |
KC693371 |
KC693323 |
KC693290 |
KC693256 |
KC693450 |
KC693191 |
KC693225 |
|||
| Rd. 42 30 k. SE of El Peñon, Catamarca, Argentina (22) |
26°4’ S, 67°11’ W |
MLHS |
SCL009 |
KC693372 |
- |
- |
- |
- |
- |
- |
| Quimilí, Santiago del Estero, Argentina (23) |
27°38’ S, 62°25’ W |
BS |
SCL037 |
KC693353 |
- |
- |
- |
- |
- |
- |
| SCL038 |
KC693354 |
KC693321 |
KC693287 |
KC693253 |
KC693447 |
KC693188 |
KC693222 |
|||
| SCL044 |
KC693355 |
- |
- |
- |
- |
- |
- |
|||
| SCL048 |
KC693356 |
- |
- |
- |
- |
- |
- |
|||
| SCL051 |
KC693357 |
- |
- |
- |
- |
- |
- |
|||
| SCL052 |
KC693358 |
- |
- |
- |
- |
- |
- |
|||
| Reserva Natural del Iberá, Corrientes, Argentina (24) |
28°06’ S, 57°06’ W |
BS |
SCL507 |
KC693397 |
KC693334 |
KC693302 |
KC693268 |
KC693462 |
KC693203 |
KC693236 |
| SCL508 |
KC693398 |
- |
- |
- |
- |
- |
- |
|||
| Mendoza, Mendoza, Argentina (25) |
32°53’ S, 68°49’ W |
BS |
SCL502 |
KC693399 |
KC693332 |
KC693300 |
KC693266 |
KC693460 |
KC693201 |
- |
| SCL503 |
KC693400 |
KC693333 |
KC693301 |
KC693267 |
KC693461 |
KC693202 |
KC693235 |
|||
| SCL504 |
KC693401 |
- |
- |
- |
- |
- |
- |
|||
| La Reja, Buenos Aires, Argentina (26) |
34°40 S’, 58°50’ W |
BS |
SCL010 |
KC693390 |
- |
- |
- |
- |
- |
- |
| Magdalena, Buenos Aires, Argentina (27) |
35°04’ S, 57°32’ W |
BS |
SCL110 |
KC693391 |
KC693328 |
KC693296 |
KC693262 |
KC693456 |
KC693197 |
KC693231 |
| SCL111 |
KC693392 |
- |
- |
- |
- |
- |
- |
|||
| SCL112 |
KC693393 |
KC693329 |
KC693297 |
KC693263 |
KC693457 |
KC693198 |
KC693232 |
|||
| SCL113 |
KC693394 |
KC693330 |
KC693298 |
KC693264 |
KC693458 |
KC693199 |
KC693233 |
|||
| SCL115 |
KC693395 |
KC693331 |
KC693299 |
KC693265 |
KC693459 |
KC693200 |
KC693234 |
|||
| Isla de Mocha, Arauco, Chile (28) |
38°23’ S, 73°52’ W |
SS |
AMNH 387432 |
KC693433 |
- |
- |
- |
- |
- |
- |
| Puerto Montt, Llanquihue, Chile (29) |
41°28’ S, 72°56’ W |
SS |
AMNH 182548 |
KC693435 |
- |
- |
- |
- |
- |
- |
| Golfo de Ancud, Palena, Chile (30) |
43°37’ S, 71°48’ W |
SS |
AMNH 182547 |
KC693434 |
- |
- |
- |
- |
- |
- |
| Trelew, Chubut, Argentina (31) |
43°15’ S, 65°18’ W |
BS |
SCL089 |
KC693373 |
- |
- |
- |
- |
- |
- |
| SCL090 |
KC693374 |
- |
- |
- |
- |
- |
- |
|||
| SCL091 |
KC693375 |
- |
- |
- |
- |
- |
- |
|||
| SCL092 |
KC693376 |
- |
- |
- |
- |
- |
- |
|||
| SCL093 |
KC693377 |
- |
- |
- |
- |
- |
- |
|||
| Güer Aike, Santa Cruz, Argentina (32) |
51°39’ S, 69°35’ W |
BS |
SCL096 |
KC693378 |
KC693324 |
KC693291 |
KC693257 |
KC693451 |
KC693192 |
KC693226 |
| SCL097 |
KC693379 |
- |
- |
- |
- |
- |
- |
|||
| SCL098 |
KC693380 |
- |
- |
- |
- |
- |
- |
|||
| SCL099 |
KC693381 |
- |
- |
- |
- |
- |
- |
|||
| SCL100 |
KC693382 |
- |
- |
- |
- |
- |
- |
|||
| SCL101 |
KC693383 |
- |
- |
- |
- |
- |
- |
|||
| SCL102 |
KC693384 |
- |
- |
- |
- |
- |
- |
|||
| Ushuaia, Tierra del Fuego, Argentina (33) |
54°48’ S, 68°18’ W |
BS |
SCL103 |
KC693385 |
- |
- |
- |
- |
- |
- |
| SCL104 |
KC693386 |
KC693325 |
KC693292 |
KC693258 |
KC693452 |
KC693193 |
KC693227 |
|||
| SCL105 |
- |
- |
KC693293 |
KC693259 |
KC693453 |
KC693194 |
KC693228 |
|||
| SCL106 |
KC693387 |
KC693326 |
KC693294 |
KC693260 |
KC693454 |
KC693195 |
KC693229 |
|||
| SCL107 |
KC693388 |
KC693327 |
KC693295 |
KC693261 |
KC693455 |
KC693196 |
KC693230 |
|||
| SCL108 | KC693389 | - | - | - | - | - | - |
Localities from which Zonotrichia capensis individuals were sampled; genes amplified for each sample are indicated together with their GenBank accession numbers.
aZonotrichia albicollis and Zonotrichia querula individuals obtained from Kingston, Ontario, Canada and Churchill, Manitoba, Canada, respectively were used as outgroups. GenBank accession Numbers: KC693445; KC693351; KC693319; KC693285; KC693479; KC693220; KC693251; KC693446; KC693352; KC693320; KC693286; KC693221; KC693252.
bMLHS, pectoral muscle, liver or heart sample; BS, blood sample; SS, museum study skin.
cAMNH, American Museum of Natural History; LSUMZ, Louisiana State University Museum of Zoology.