Table 1.
Statistics of biochemical datasets.
| Min Vertices | Min Edges | Max Vertices | Max Edges | Avg (SD) Vertices | Avg (SD) Edges | Avg (SD) Degree | Total Labels | Avg (SD) Labels | |
|---|---|---|---|---|---|---|---|---|---|
|
AIDS Small Sparse |
4 | 8 | 245 | 500 | 44.98 (21.68) |
93.91 (45.05) |
4.17 (2.28) |
62 | 4.36 (0.86) |
|
PDBSv1 Large Sparse |
240 | 480 | 33067 | 61546 | 5663.6 (6954.82) |
86661.27 (12365.7) |
3.21 (2.52) |
14 | 5.9 (1.04) |
|
PDBSv2 Medium Sparse |
1683 | 3414 | 7979 | 16302 | 3614.1 (1772.06) |
7386.2 (3814.08) |
4.08 (17.47) |
13 | 4.63 (0.76) |
|
PDBSv3 Small Dense |
7 | 16 | 883 | 18832 | 376.86 186.66 |
8679.48 3814.08 |
44.78 (17.47) |
21 | 18.86 (3.48) |
|
Graemlin Medium Dense |
1081 | 12961 | 6726 | 230468 | 3167.6 (1568.66) |
87759.6 (75939.2) |
48.14 (63.61) |
31676 | 3167.6 (1568.66) |
|
PPI Large Dense |
5720 | 51464 | 12575 | 332458 | 7827.1 (2120.15) |
107135 (82730.9) |
28.66 (47.44) |
78271 | 7827.1 (2120.15) |
Statistics of the number of vertices and number of edges. These describe the minimum, maximum and average number of vertices and edges in the dataset. Total Labels is the total number of labels in the dataset. Avg Label is the average number of labels per graph. Standard deviations are reported in parentheses.