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. 2013 Apr 17;14(Suppl 6):S5. doi: 10.1186/1471-2105-14-S6-S5

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Copyright © 2012 Olivieri et al.; licensee BioMed Central Ltd.

This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

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The architecture. The figure shows the relation between the ExtractGC module and other software components that makes up the architecture of pyBioImage. The core application of the pyBioImage application is written in Python with the graphical user library wxPython. The ExtractGC module consists of python classes, used for high level processing, and low-level pixel operations performed in C, exposed through the Python C-extension API. Numerical algorithms, image analysis, image I/O, the graphical user interface and data visualization leverage the use of powerful open-source libraries.