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. 2013 Apr 22;14(Suppl 7):S8. doi: 10.1186/1471-2105-14-S7-S8

Table 2.

miRTarBase results

α N(%/%) level 1 max level best level time (s)

#cc pMF pBP μq lev #cc pMF pBP μq lev #cc pMF pBP μq
HOCCLUS2

0.1 10/37 75 1.000 1.000 1.00 6 5 0.281 0.289 0.13 2 38 0.000 0.000 0.72 10


0.2 5 10 0.064 0.060 0.24 2 38 0.000 0.000 0.72 9


0.3 4 18 0.000 0.000 0.40 2 38 0.000 0.000 0.72 9


0.4 4 23 0.000 0.000 0.49 2 38 0.000 0.000 0.72 10


0.5 3 33 0.000 0.000 0.66 2 38 0.000 0.000 0.72 9

HOCCLUS (with METIS)

0.1 100/100 75 0.000 0.003 0.19 3 51 0.013 0.031 0.09 1 75 0.000 0.003 0.19 51


0.2 2 73 0.000 0.007 0.14 1 75 0.000 0.003 0.19 82


0.3 1 75 0.000 0.003 0.19 1 75 0.000 0.003 0.19 94


0.4 1 75 0.000 0.003 0.19 1 75 0.000 0.003 0.19 94


0.5 1 75 0.000 0.003 0.19 1 75 0.000 0.003 0.19 92

ROCC

- 35/17 198 0.231 1.000 0.01 - - - - - - - - - - 149

miRTarBase results. N(%/%) represents the percentage of biclustered mRNAs and miRNAs. #cc is the number of biclusters. lev represents the level number. Results do not vary at the first level since it does not depend on the α value. β does not influence results because of binary interaction scores.