Table 4.
α | β | level 1 | max level | best level | time (s) | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
#cc | pMF | pBP | μq | lev | #cc | pMF | pBP | μq | lev | #cc | pMF | pBP | μq | ||||||
HOCCLUS2 | |||||||||||||||||||
0.1 | 0.3 | 43/87 | 700 | 1.000 | 1.000 | 0.49 | 9 | 56 | 0.000 | 0.000 | 0.12 | 2 | 350 | 0.000 | 0.000 | 0.41 | 5797 | ||
0.2 | 7 | 183 | 0.000 | 0.000 | 0.24 | 3 | 210 | 0.000 | 0.000 | 0.31 | 6416 | ||||||||
0.3 | 5 | 355 | 1.000 | 1.000 | 0.36 | 1 | 700 | 1.000 | 1.000 | 0.49 | 7783 | ||||||||
0.1 | 0.4 | 36/86 | 619 | 1.000 | 1.000 | 0.52 | 8 | 41 | 0.411 | 0.331 | 0.11 | 3 | 155 | 0.004 | 0.009 | 0.32 | 4089 | ||
0.2 | 7 | 144 | 0.006 | 0.001 | 0.24 | 7 | 144 | 0.006 | 0.001 | 0.24 | 4816 | ||||||||
0.3 | 6 | 274 | 1.000 | 1.000 | 0.35 | 1 | 619 | 1.000 | 1.000 | 0.52 | 6123 | ||||||||
0.1 | 0.5 | 25/81 | 599 | 1.000 | 1.000 | 0.58 | 8 | 34 | 0.284 | 0.273 | 0.12 | 4 | 77 | 0.345 | 0.167 | 0.27 | 3439 | ||
0.2 | 7 | 101 | 0.315 | 0.146 | 0.23 | 5 | 108 | 0.257 | 0.112 | 0.26 | 3958 | ||||||||
0.3 | 6 | 202 | 1.000 | 0.221 | 0.34 | 5 | 205 | 1.000 | 0.206 | 0.35 | 4361 | ||||||||
METIS | |||||||||||||||||||
- | - | 100/100 | 700 | 1.000 | 1.000 | 0.36 | - | - | - | - | - | - | - | - | - | - | 50 | ||
- | - | 619 | 1.000 | 1.000 | 0.40 | - | - | - | - | - | - | - | - | - | - | 51 | |||
- | - | 599 | 1.000 | 1.000 | 0.35 | - | - | - | - | - | - | - | - | - | - | 52 | |||
ROCC | |||||||||||||||||||
- | - | 1/1 | 122 | 1.000 | 1.000 | 0.01 | - | - | - | - | - | - | - | - | - | - | 16531 |
mirDIP results. represents the percentage of biclustered mRNAs and miRNAs. #cc is the number of biclusters. lev represents the level number.