Table 5.
α | β | level 1 | max level | best level | time (s) | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
#cc | pMF | pBP | μq | lev | #cc | pMF | pBP | μq | lev | #cc | pMF | pBP | μq | ||||
HOCCLUS2 | |||||||||||||||||
0.1 | 0.3 | 45/88 | 758 | 1.000 | 1.000 | 0.50 | 9 | 57 | 0.023 | 0.005 | 0.11 | 2 | 379 | 0.000 | 0.000 | 0.41 | 7319 |
0.2 | 7 | 194 | 0.016 | 0.004 | 0.25 | 3 | 221 | 0.001 | 0.000 | 0.31 | 9022 | ||||||
0.3 | 6 | 374 | 1.000 | 1.000 | 0.36 | 1 | 758 | 1.000 | 1.000 | 0.50 | 9940 | ||||||
0.1 | 0.4 | 37/85 | 667 | 1.000 | 1.000 | 0.54 | 7 | 42 | 0.434 | 0.206 | 0.11 | 4 | 58 | 0.094 | 0.016 | 0.21 | 4760 |
0.2 | 6 | 145 | 0.096 | 0.004 | 0.24 | 5 | 148 | 0.053 | 0.004 | 0.25 | 5415 | ||||||
0.3 | 5 | 273 | 1.000 | 1.000 | 0.34 | 1 | 667 | 1.000 | 1.000 | 0.54 | 6567 | ||||||
0.1 | 0.5 | 27/81 | 622 | 1.000 | 1.000 | 0.60 | 8 | 35 | 0.311 | 0.346 | 0.12 | 3 | 156 | 0.151 | 0.263 | 0.37 | 3792 |
0.2 | 7 | 105 | 0.221 | 1.000 | 0.24 | 3 | 168 | 0.123 | 0.298 | 0.38 | 4121 | ||||||
0.3 | 6 | 205 | 0.374 | 1.000 | 0.36 | 2 | 314 | 0.256 | 1.000 | 0.50 | 4685 | ||||||
METIS | |||||||||||||||||
- | - | 100/100 | 758 | 1.000 | 1.000 | 0.29 | - | - | - | - | - | - | - | - | - | - | 50 |
- | - | 667 | 1.000 | 1.000 | 0.39 | - | - | - | - | - | - | - | - | - | - | 51 | |
- | - | 622 | 1.000 | 1.000 | 0.35 | - | - | - | - | - | - | - | - | - | - | 50 | |
ROCC | |||||||||||||||||
- | - | 1/1 | 122 | 1.000 | 1.000 | 0.01 | - | - | - | - | - | - | - | - | - | - | 16764 |
FmirDIP results. represents the percentage of biclustered mRNAs and miRNAs. #cc is the number of biclusters. Lev represents the level number.