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. Author manuscript; available in PMC: 2014 Apr 2.
Published in final edited form as: Biochemistry. 2013 Mar 22;52(13):2291–2301. doi: 10.1021/bi3016845

Table 1.

X-ray data collection, processing, and refinement statistics for the ethylamine- and benzylamine-HPAO-1 complexes.

Data collection and processing statistics
substrate ethylamine benzylamine
beamline 23-ID, GM/CA-CAT 23-ID, GM/CA-CAT
space group P21 P21
unit cell dimensions a × b × c, (Å); β (°) 104.4, 232.8, 105.1; 96.7 104.2, 233.7, 105.1; 96.6
no. of molecules in the unit cell, Z 3 3
resolution (Å)a 50.00-2.18 (2.22-2.18) 50.00-2.25 (2.29-2.25)
no. of unique reflections 257,277 232,595
completeness (%)a 100.0 (100.0) 98.8 (97.7)
Rmerge(%)a,b 0.108 (0.457) 0.089 (0.324)
I/σ(I) 10.0 (1.7) 9.8 (1.8)
redundancya 3.8 (3.6) 4.3 (4.1)
Structure refinement statistics
refinement resolution range (Å)a 49.0-2.18 (2.24-2.18) 48.9-2.25 (2.31-2.25)
no. of reflections in the working seta 244,276 (16,892) 220,912 (16,116)
no. of reflections in the test seta 12,922 (875) 11,654 (793)
Rwork(%)a,c 0.150 (0.243) 0.169 (0.258)
Rfree(%)a,d 0.201 (0.296) 0.230 (0.332)
rmsd from ideal geometry
 bond lengths (Å) 0.016 0.023
 bond angles (°) 1.59 1.95
Ramachadran plot
 energetically favored regions (%) 95.2 94.6
 allowed regions (%) 4.2 4.7
 outliers (%) 0.6 0.7
Overall average B factor (Å2) 33.3 22.6
Cruickshank’s DPI (Å) 0.19 0.23
a

Numbers in parentheses refer to the highest-resolution shell.

b

Rmergehkl Σi|Ihkl,i - 〈Ihkl〉|/ΣhklΣi Ihkl,i, where I is the observed intensity and 〈I〉 is the average intensity for multiple measurements.

c

Rwork = Σ||Fo/-|Fc||/Σ|Fo|, where |Fo| is the observed structure factor amplitude and |Fc| is the calculated structure factor amplitude for 95% of the data used in refinement.

d

Rfree based on 5% of the data excluded from refinement.