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. 2013 Mar 1;14(3):5013–5024. doi: 10.3390/ijms14035013

Figure 4.

Figure 4

Alignment of amino acid residues of HIV-1 subtype C (residues 1–150). The consensus was generated from 37 viruses. The global subtype B and C consensuses were obtained also from HIV sequence database. The entire consensus sequences were aligned using BioEdit software. The conserved residues in the HHCC motif (*) and the DDE (+) are noted. All positions that agree with the global subtype B consensus sequence are denoted by a dot (.); while ambiguous amino acids are denoted by an X. The test consensus was identical to the global subtype C consensus, except at two positions (V72I and R269K). It differed from the global subtype B consensus at 10 positions (R14K, D25E, M50I, F100Y, L101I, V113I, N134G, E167D, T218I and D278A).