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. 2007 Feb 14;2:1–16.
Accession Cluster Name Expression Fold Diff
NM_001644.2 560 apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1 (APOBEC1) Exclusive 54
NM_001804.1 1545 caudal type homeo box transcription factor 1 (CDX1) Exclusive 14
NM_005814 143131 glycoprotein A33 (transmembrane) (GPA33) Exclusive 11
NM_001986.1 77711 ets variant gene 4 (E1A enhancer binding protein, E1AF) (ETV4) Significant 20
NM_001265.2 77399 caudal type homeo box transcription factor 2 (CDX2) Significant 20
NM_138768.1 116051 myeloma overexpressed gene positive multiple myelomas) (MYEOV) Significant 14
NM_004963.1 1085 guanylate cyclase 2C (heat stable enterotoxin receptor) (GUCY2C) Significant 13
NM_024017.3 86327 homeo box B9 (HOXB9) Significant 6
XM_032721.3 109358 ATPase, Class V, type 10B (ATP10B) Significant 5
NM_033266.1 114905 ER to nucleus signalling 2 (ERN2) Significant 4
NM_019010.1 84905 cytokeratin 20 (KRT20) Significant 4
NM_005310.1 86859 growth factor receptor-bound protein 7 (GRB7) Significant 4
NM_001738.1 23118 carbonic anhydrase I (CA1) Significant 4
NM_004306.1 181107 annexin A13 (ANXA13) Significant 3
NM_007028.2 91096 tripartite motif-containing 31 (TRIM31) Significant
NM_001500.1 1054435 GDP-mannose 4,6-dehydratase (GMDS) Preferential 39
NM_005628.1 183556 solute carrier family 1 (neutral amino acid transporter), member 5 (SLC1A5) Preferential 36
NM_002276.2 182265 keratin 19 (KRT19) Preferential 33
NM_001569.2 182018 interleukin-1 receptor-associated kinase 1 (IRAK1) Preferential 23
NM_002295 356261 laminin receptor 1 (67kD, ribosomal protein SA) (LAMR1) Preferential 19
NM_001402 493552 eukaryotic translation elongation factor 1 alpha 1 (EEF1A1) Preferential 19
NM_002087 180577 granulin (GRN) Preferential 19
NM_006597 180414 heat shock 70kD protein 8 (HSPA8) Preferential 18
NM_005507 170622 cofilin 1 (non-muscle) (CFL1) Preferential 17
NM_001903 254321 catenin (cadherin-associated protein), alpha 1 (102kD) (CTNNA1) Preferential 17
NM_002819 172550 polypyrimidine tract binding protein 1 (PTBP1) Preferential 17
NM_007363 355861 non-POU domain containing, octamer-binding (NONO) Preferential 17
NM_002568 poly(A) binding protein, cytoplasmic 1 (PABPC1) Preferential 16
NM_006516 169902 solute carrier family 2 (facilitated glucose transporter), member 1 (SLC2A1) Preferential 16
NM_002046 glyceraldehyde-3-phosphate dehydrogenase (GAPD) Preferential 16
NM_003906 389037 MCM3 minichromosome maintenance deficient 3 protein (MCM3AP) Preferential 15
NM_004433 67928 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) (ELF3) Preferential 14
NM_007127 166068 villin 1 (VIL1) Preferential 14
NM_000218 367809 potassium voltage-gated channel, KQT-like subfamily, member 1 (KCNQ1) Preferential 13
NM_003379 403997 villin 2 (ezrin) (VIL2) Preferential 13
NM_001084 153357 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 (PLOD3) Preferential 12
NM_005789 152978 proteasome (prosome, macropain) activator subunit 3 (PSME3) Preferential 12
NM_005561 150101 lysosomal-associated membrane protein 1 (LAMP1) Preferential 11
NM_005080 437638 X-box binding protein 1 (XBP1) Preferential 11
NM_002105 H2A histone family, member X (H2AFX) Preferential 11
NM_004429 144700 ephrin-B1 (EFNB1) Preferential 10
NM_014498 golgi phosphoprotein 4 (GOLPH4) Preferential 9
139800 high-mobility group (nonhistone chromosomal) protein isoforms (HMGIY) Preferential 9
NM_007052 132370 NADPH oxidase 1 (NOX1) Preferential 9
NM_001416 129673 eukaryotic translation initiation factor 4A, isoform 1(EIF4A1) Preferential 9
NM_004655 127337 axin 2 (conductin, axil) (AXIN2) Preferential 9
NM_004442 125124 EphB2 (EPHB2) Preferential 9
NM_000967 119598 ribosomal protein L3 (RPL3) Preferential 8
NM_005063 119597 stearoyl-CoA desaturase (delta-9-desaturase) (SCD) Preferential 8
NM_000090 443625 collagen, type III, alpha 1 (COL3A1) Preferential 8
NM_012423 419535 ribosomal protein L13a (RPL13A) Preferential 8
Preferential
NM_006026 75307 H1 histone family, member X (H1FX) Preferential 8
NM_001923 290758 damage-specific DNA binding protein 1 (127kD) (DDB1) Preferential 8
NM_032044 105484 regenerating gene type IV (REG-IV) Preferential 8
NM_003258 105097 thymidine kinase 1, soluble (TK1) Preferential 7
XM_039877 102482 mucin 5, subtype B, tracheobronchial (MUC5B) Preferential 7
NM_005724 100090 tetraspan 3 (TSPAN-3) Preferential 7
NM_000972 416801 ribosomal protein L7a (RPL7A) Preferential 7
NM_018952 98428 homeo box B6 (HOXB6) Preferential 7
NM_015925 312129 Similar to liver-specific bHLH-Zip transcription factor Preferential 7
NM_000075 95577 cyclin-dependent kinase 4 (CDK4) Preferential 6
NM_006408 226391 anterior gradient 2 homolog (Xenepus laevis) (AGR2) Preferential 6
NM_004044 90280 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase (ATIC) Preferential 6
NM_004494 89525 hepatoma-derived growth factor (high-mobility group protein 1-like) (HDGF) Preferential 6
NM_004063 89436 cadherin 17, LI cadherin (liver-intestine) (CDH17) Preferential 6
NM_000213 85266 integrin, beta 4 (ITGB4) Preferential 6
NM_001730 84728 Kruppel-like factor 5 (intestinal) (KLF5) Preferential 6
NM_001255 82906 CDC20 cell division cycle 20 homolog (S. cerevisiae) (CDC20) Preferential 5
NM_001747 82422 capping protein (actin filament), gelsolin-like (CAPG) Preferential 5
NM_002534 442936 2′,5′-oligoadenylate synthetase 1 (40–46 kD) (OAS1) Preferential 5
NM_000178 82327 glutathione synthetase (GSS) Preferential 5
NM_000903 406515 NAD(P)H dehydrogenase, quinone 1 (NQO1) Preferential 5
NM_002394 79748 solute carrier family 3 member 2 (SLC3A2) Preferential 5
NM_005567 79339 lectin, galactoside-binding, soluble, 3 binding protein (LGALS3BP) Preferential 5
NM_000404 galactosidase, beta 1 (GLB1) Preferential 5
NM_006907 458332 pyrroline-5-carboxylate reductase 1 (PYCR1) Preferential 5
NM_000291 78771 phosphoglycerate kinase 1 (PGK1) Preferential 5
NM_002635 290404 solute carrier family 25 member 3 (SLC25A3) Preferential 5
NM_001640 221589 N-acylaminoacyl-peptide hydrolase (APEH) Preferential 5
NM_005030 329989 polo-like kinase (Drosophila) (PLK) Preferential 5
NM_002224 77515 inositol 1,4,5-triphosphate receptor, type 3 (ITPR3) Preferential 4
NM_002668 77422 proteolipid protein 2 (colonic epithelium-enriched) (PLP2) Preferential 4
NM_016343 77204 centromere protein F (350/400kD, mitosin) (CENPF) Preferential 4
NM_005916 438720 MCM7 minichromosome maintenance deficient 7 (S. cerevisiae) (MCM7) Preferential 4
NM_001006 356572 ribosomal protein S3A (RPS3A) Preferential 4
NM_000701 371889 ATPase, Na+/K+ transporting, alpha 1 polypeptide (ATP1A1) Preferential 4
NM_000990 356542 ribosomal protein L27a (RPL27A) Preferential 4
NM_015379 410497 brain protein I3 (BRI3) Preferential 4
NM_012408 191990 protein kinase C binding protein 1 (PRKCBP1) Preferential 4
NM_002773 75799 protease, serine, 8 (prostasin) (PRSS8) Preferential 4
NM_002951 406532 ribophorin II (RPN2) Preferential 4
NM_001673 446546 asparagine synthetase (ASNS) Preferential 4
NM_002862 145820 phosphorylase, glycogen; brain (PYGB) Preferential 4
NM_000918 410578 procollagen-proline, 2-oxoglutarate 4-dioxygenase (P4HB) Preferential 3
NM_000228 436983 laminin, beta 3 (nicein (125kD), kalinin (140kD), BM600 (125kD) (LAMB3) Preferential 3
NM_001034 226390 ribonucleotide reductase M2 polypeptide (RRM2) Preferential 3
NM_003217 35052 testis enhanced gene transcript (BAX inhibitor 1) (TEGT) Preferential 3
NM_001658 286221 ADP-ribosylation factor 1 (ARF1) Preferential 3
NM_000014 alpha-2-macroglobulin (A2M) Preferential 3
NM_007355 74335 heat shock 90kD protein 1, beta (HSPCB) Preferential 3
NM_001288 414565 chloride intracellular channel 1 (CLIC1) Preferential 3
Preferential
NM_007367 74111 RNA binding protein (RALY) Preferential 3
NM_002483 436718 carcinoembryonic antigen-related cell adhesion molecule 6 (CEACAM6) Preferential 3
NM_021220 386387 zinc finger protein 339 (ZNF339) Preferential 3
NM_001202 68879 bone morphogenetic protein 4 (BMP4) Preferential 3
NM_000224 406013 keratin 18 (KRT18) Preferential 3
NM_019894 414005 transmembrane protease, serine 4 (TMPRSS4) Preferential 3
NM_002032 448738 ferritin, heavy polypeptide 1 (FTH1) Preferential 3
NM_016276 62863 serum/glucocorticoid regulated kinase 2 (SGK2) Preferential 3
NM_003756 127149 eukaryotic translation initiation factor 3, subunit 3 (gamma, 40kD) (EIF3S3) Preferential 3
NM_003751 371001 eukaryotic translation initiation factor 3, subunit 9 (eta, 116kD) (EIF3S9) Preferential 3
NM_004526 57101 MCM2 minichromosome maintenance deficient 2, (S. cerevisiae) (MCM2) Preferential 3
NM_021978 56937 suppression of tumorigenicity 14 (colon carcinoma, epithin) (ST14) Preferential 3
NM_006187 129895 2′-5′-oligoadenylate synthetase 3 (100 kD) (OAS3) Preferential 3
NM_003753 55682 eukaryotic translation initiation factor 3, subunit 7 (zeta, 66/67kD) (EIF3S7) Preferential 3
NM_001712 512682 carcinoembryonic antigen-related cell adhesion molecule 1 (CEACAM1) Preferential 3
NM_005727 tetraspan 1 (TSPAN-1) Preferential 3
NM_021102 31439 serine protease inhibitor, Kunitz type, 2 (SPINT2) Preferential 3
NM_007183 26557 plakophilin 3 (PKP3) Preferential 3
NM_001306 25640 claudin 3 (CLDN3) Preferential 3
NM_004572 25051 plakophilin 2 (PKP2) Preferential 3
NM_004289 404741 nuclear factor (erythroid-derived 2)-like 3 (NFE2L3) Preferential 3
NM_003627 444159 SLC43A1 Preferential 2
NM_005498 18894 adaptor-related protein complex 1, mu 2 subunit (AP1M2) Preferential 2
NM_005558 18141 ladinin 1 (LAD1) Preferential 2
NM_002707 17883 protein phosphatase 1G magnesium-dependent, gamma isoform (PPM1G) Preferential 2
NM_020384 16098 claudin 2 (CLDN2) Preferential 2
NM_001614 14376 actin, gamma 1 (ACTG1) Preferential 2
NM_052854 405961 old astrocyte specifically induced substance (OASIS) Preferential 2
NM_016234 11638 fatty-acid-Coenzyme A ligase, long-chain 5 (FACL5) Preferential 2
NM_021107 411125 mitochondrial ribosomal protein S12 (MRPS12) Preferential 2
NM_002335 6347 low density lipoprotein receptor-related protein 5 (LRP5) Preferential 2
NM_022085 430169 thioredoxin related protein (MGC3178) Preferential 2
NM_033049 5940 mucin 13, epithelial transmembrane (MUC13) Preferential 2
NM_014865 chromosome condensation-related SMC-associated protein 1 (CNAP1) Preferential 2
NM_006098 5662 guanine nucleotide binding protein beta polypeptide 2-like 1 (GNB2L1) Preferential 2
NM_024526 5366 epidermal growth factor receptor pathway related protein 3 (EPS8R3) Preferential 1
NM_006149 5302 lectin, galactoside-binding, soluble, 4 (galectin 4) (LGALS4) Preferential 1
NM_014275 437277 mannosyl (alpha-1,3-) (MGAT4B) Preferential 1
NM_003752 388163 eukaryotic translation initiation factor 3, subunit 8 (110kD) (EIF3S8) Preferential
3989 plexin B2 (PLXNB2) Preferential
NM_002447 2942 macrophage stimulating 1 receptor (c-met-related tyrosine kinase) (MST1R) Preferential
NM_001038 sodium channel, nonvoltage-gated 1 alpha (SCNN1A) Preferential
NM_002083 2704 glutathione peroxidase 2 (gastrointestinal) (GPX2) Preferential
NM_005186 356181 calpain 1, (mu/I) large subunit (CAPN1) Preferential
NM_001404 256184 eukaryotic translation elongation factor 1 gamma (EEF1G) Preferential
NM_003334 406683 ubiquitin-activating enzyme E1 (UBE1) Preferential
NM_005998 1708 chaperonin containing TCP1, subunit 3 (gamma) (CCT3) Preferential
NM_012073 1600 chaperonin containing TCP1, subunit 5 (epsilon) (CCT5) Preferential
NM_000077 421349 cyclin-dependent kinase inhibitor 2A (melanoma (CDKN2A) Preferential
NM_002014 848 FK506 binding protein 4 (59kD) (FKBP4) Preferential
NM_004502 436181 homeo box B7 (HOXB7) Preferential
NM_004966 808 heterogeneous nuclear ribonucleoprotein F (HNRPF) Preferential
NM_002354 692 tumor-associated calcium signal transducer 1 (TACSTD1) Preferential
NM_005435 334 Rho guanine nucleotide exchange factor (GEF) 5 (ARHGEF5) Preferential
NM_002457 458274 mucin 2, intestinal/tracheal (MUC2) Preferential
NM_000968 186350 ribosomal protein L4 (RPL4) Preferential