Table 5. OTUs enriched in specific treatments, the nearest related isolate genome and number of VFs.
Treatment Enriched | OTU | Phylum/class | Best genomic match | % ID | # VFs |
---|---|---|---|---|---|
Amansia | OTU854 | Flavobacteria | Fluviicola taffensis DSM 16823 | 88 | 541 |
Amn/Hala | OTU14 | α-Proteobacteria | Ruegeria spp. TM1040 | 91 | 672 |
Halimeda | OTU162 | Flavobacteria | Fluviicola taffensis DSM 16823 | 84 | 541 |
Porites | OTU173 | α-Proteobacteria | No genome >80% identity | NA | NA |
Porites | OTU136 | γ-Proteobacteria | Cellvibrio japonicus Ueda107 | 91 | 750 |
Porites | OTU50 | α-Proteobacteria | Hyphomonas neptunium | 92 | 559 |
Porites | OTU642 | γ-Proteobacteria | Congregibacter litoralis KT71 | 92 | 652 |
Porites | OTU115 | α-Proteobacteria | Micavibrio aeruginosavorus | 85 | 390 |
Porites | OTU197 | α-Proteobacteria | Erythrobacter litoralis | 99 | 430 |
Turbinaria | OTU6 | γ-Proteobacteria | Pseudoalteromonas spp. SM9913 | 91 | 727 |
Turbinaria | OTU27 | γ-Proteobacteria | Pseudoalteromonas spp. SM9913 | 92 | 727 |
Turbinaria | OTU39 | γ-Proteobacteria | Alteromonas spp. SN2 | 93 | 789 |
Turbinaria | OTU18 | γ-Proteobacteria | Alteromonas macleodii | 93 | 759 |
Turbinaria | OTU59 | γ-Proteobacteria | Vibrio splendidus LGP32 | 93 | 875 |
Turbinaria | OTU102 | γ-Proteobacteria | Vibrio splendidus LGP32 | 93 | 875 |
Turbinaria | OTU174 | α-Proteobacteria | Ruegeria pomeroyi DSS-3 | 87 | 690 |
Turbinaria | OTU100 | α-Proteobacteria | Ruegeria spp. TM1040 | 93 | 672 |
Turbinaria | OTU17 | γ-Proteobacteria | Pseudoalteromonas spp. SM9913 | 95 | 727 |
Ambient | OTU43 | α-Proteobacteria | Pelagibacter ubique HTCC1062 | 89 | 240 |
Ambient | OTU9 | α-Proteobacteria | Pelagibacter ubique HTCC1062 | 97 | 240 |
Ambient | OTU38 | Flavobacteria | Fluviicola taffensis DSM 16823 | 87 | 541 |
Ambient | OTU22 | Cyanobacteria | Synechococcus spp. CC9605 | 96 | 289 |
Ambient | OTU15 | α-Proteobacteria | No genome >80% identity | NA | NA |
Abbreviations: ID, identity; NA, not applicable; OTU, operational taxonomic unit; VF, virulence factor.
OTU14 was enriched in both Amansia and Halimeda treatments. Queries all >250 bp and expect scores all <e−05.