Table 2.
Voxel-wise inference with the single-locus model: The top 20 most associated SNPs ranked by voxel-wise from RFT.
Chr | SNP (gene) | Min. puc | Min. voxel | Talairach coordinates (mm) |
---|---|---|---|---|
6 | rs2132683 | 2.419 × 10−10 | 6.388 × 10−6 | [−36, −68, 4] |
6 | rs713155 | 2.945 × 10−10 | 7.649 × 10−6 | [4, −52, 0] |
1 | rs476463 (CSMD2) | 3.010 × 10−10 | 7.817 × 10−6 | [12, −36, 64] |
7 | rs2429582 (AK025672) | 1.002 × 10−10 | 1.016 × 10−5 | [68, −4, −8] |
3 | rs9990343 | 5.061 × 10−10 | 1.256 × 10−5 | [28, 0, 56] |
11 | rs490592 | 1.322 × 10−9 | 3.061 × 10−5 | [20, 24, 32] |
20 | rs11696501 | 1.339 × 10−9 | 3.101 × 10−5 | [−28, −44, −4] |
3 | rs10511089 | 1.704 × 10−9 | 3.849 × 10−5 | [8, −92, 12] |
8 | rs4534106 | 2.161 × 10−9 | 4.814 × 10−5 | [−60, −28, −4] |
6 | rs11970254 | 2.175 × 10−9 | 4.846 × 10−5 | [64, −8, 4] |
9 | rs7025303 (X75342) | 2.192 × 10−9 | 4.872 × 10−5 | [−12, −68, 28] |
9 | rs7873102 (X75342) | 2.251 × 10−9 | 4.982 × 10−5 | [−12, −68, 28] |
1 | rs710865 (KIAA0090) | 2.519 × 10−9 | 5.560 × 10−5 | [−28, −44, −40] |
6 | rs9362770 | 2.831 × 10−9 | 6.179 × 10−5 | [4, −52, 0] |
20 | rs2073233 | 3.023 × 10−9 | 6.528 × 10−5 | [36, −104, 16] |
9 | rs776019 (X75342) | 3.500 × 10−9 | 7.527 × 10−5 | [−12, −68, 28] |
2 | rs12479254 (BOK) | 3.689 × 10−9 | 7.902 × 10−5 | [32, −44, −8] |
16 | rs11643520 | 4.186 × 10−9 | 8.827 × 10−5 | [−60, −76, −12] |
5 | rs4296809 | 4.200 × 10−9 | 8.857 × 10−5 | [36, −40, 4] |
9 | rs776015 | 4.362 × 10−9 | 9.195 × 10−5 | [−12, −68, 28] |