Table 2.
Primers and PCR conditions for MLSA.
| Genes | Primer name | Primers (5′−3′) | Primer combination and annealing temperature (°C) | Amplicon size (bp) |
|---|---|---|---|---|
| atpA | atpA101F | ADGTDGGWGAYGGTGTYGC | 101F-1081R: 55 | 980 |
| atpA1081R | CGTTRATAGCWGGTCTDATACC | |||
| atpA983R | ACGTCACCBGCYTKWGTTTC | 101F-983R: 52 | 882 | |
| dnaK | dnaK464F | GDCARGCWACMAARGAYGC | 55 | 741 |
| dnaK1118R | GCMACWACYTCRTCDGG | |||
| gyrB | gyrB377F | CTYCAYGGWGTWGGWGC | 52 | 1186 |
| gyrB1563R | TCWACRTCRGCRTCHGYCAT | |||
| napA | napA181F | TTCTGTGGWACDGGWTGYGG | 181F-1713R: 59 | 1532 |
| napA690F* | ATGGCWGARATGCAYCC | |||
| napA1714R | CKBGCHGCTTTRATCCARTG | |||
| napA1347R* | GRTTVAWWCCATTGTCCA | |||
| metG | metG145F | ACRGGWACMGATGARCATGG | 55 | 686 |
| metG831R | GCDGGCCARTAWACDGYATG | |||
| tkt | tkt478F | AWSGSYGTRGGTATGGC | 52 | 1063 |
| tkt1541R | TGKGTWGGDCCRTCYTC |
Primers used for sequencing reaction.