Table 2.
Calculated kinetic parameters and maximum number of incorporated deuterium into tryptic albumin peptides. The total plateau labeling, the turnover constant and half-life for each peptide were calculated using the best fit to a single exponential rise Equations (data are shown as mean ± se). The algorithm described in the text was used to calculate the best fit for the number of exchangeable hydrogens based on minimum of the sum of squares of error (SSE) differences between the observed and theoretical isotopic distribution.
Peptide sequence and molecular formula |
Calculated Total Plateau labeling (%) |
Observed Fractional Synthetic Rate (day−1) |
Half-life (day) | Maximum number of incorporated deuterium |
|
---|---|---|---|---|---|
N | SSE | ||||
TCVADENAENCDK C57 H93 N18 O27 S2 |
64.88 ± 0.13 | 0.41 ± 0.04 | 1.70 ± 0.17 | 24 | 0.00018 |
SIHTLFGDK C46 H73 N12 O14 |
22.75 ± 0.94 | 0.36 ± 0.04 | 1.96 ± 0.24 | 9 | 0.00011 |
LVQEVTDFAK C52 H85 N12 O17 |
39.41 ± 0.18 | 0.36 ± 0.03 | 1.93 ± 0.17 | 15 | 0.00016 |
FPNAEFAEITK C59 H88 N13 O18 |
45.58 ± 0.76 | 0.38 ± 0.04 | 1.86 ± 0.2 | 20 | 0.00011 |