Table 3.
Twenty most differentially expressed genes with higher expression in MGR stage relative to CSS stage
| Accession | Gene annotation1 | MGR/CSS Fold-change2 | q-value3 |
|---|---|---|---|
| AT1G24020 |
MLP-LIKE PROTEIN 423 (MLP423) |
16.7 |
2.9E-03 |
| AT5G33370 |
GDSL-like lipase |
5.7 |
2.3E-02 |
| AT2G02320 |
PHLOEM PROTEIN 2-B7 (AtPP2-B7) |
5.2 |
6.6E-03 |
| AT2G38540 |
LIPID TRANSFER PROTEIN 1 (LP1) |
5.2 |
5.0E-05 |
| AT5G24780 |
VEGETATIVE STORAGE PROTEIN 1 (VSP1) |
4.8 |
3.6E-03 |
| AT2G02850 |
PLANTACYANIN (ARPN) |
3.9 |
2.4E-03 |
| AT2G33810 |
SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 3 (SPL3) |
3.8 |
4.2E-02 |
| AT3G04290 |
LI-TOLERANT LIPASE 1 (LTL1) |
3.7 |
2.4E-03 |
| AT1G55490 |
chloroplast 60 kDa chaperonin beta subunit |
3.6 |
9.1E-04 |
| AT5G20630 |
GERMIN 3 (GER3) |
3.5 |
3.8E-04 |
| AT2G39670 |
radical SAM domain-containing protein |
3.5 |
2.1E-02 |
| AT3G47650 |
bundle-sheath defective protein 2 family / bsd2 family |
3.4 |
3.2E-02 |
| AT5G15230 |
GAST1 PROTEIN HOMOLOG 4 (GASA4) |
3.4 |
3.1E-04 |
| AT3G47340 |
GLUTAMINE-DEPENDENT ASPARAGINE SYNTHETASE (ASN1) |
3.2 |
1.3E-02 |
| AT5G20720 |
CHAPERONIN 20 (CPN20) |
3.2 |
7.6E-03 |
| AT5G55450 |
protease inhibitor/lipid transfer protein (LTP) family protein |
3.2 |
3.6E-03 |
| AT5G61170 |
40S ribosomal protein S19 (RPS19C) |
3.1 |
4.3E-02 |
| AT3G08740 |
elongation factor P (EF-P) family protein |
3.1 |
2.0E-02 |
| AT3G21410 |
F-box family protein (FBW1) |
3.1 |
2.6E-02 |
| AT2G02130 | LOW-MW CYSTEINE-RICH 68 (LCR68)(PDF2.3) | 3.0 | 3.5E-02 |
1Gene descriptions are abbreviated from TAIR10 genome release. Putative functions are stated in lowercase.
2Genes ranked according to fold-change values derived from log2 ratios of MGR (numerator) and CSS (denominator).
3 Derived from false discovery-rate correction of p-values.