Table 6.
Twenty most differentially expressed genes with higher expression in OLD stage relative to CSS stage
| Accession | Gene annotation1 | CSS/OLD Fold-change2 | q-value3 |
|---|---|---|---|
| AT1G21310 |
EXTENSIN 3 (ATEXT3) |
−3.9 |
4.8E-02 |
| AT5G09840 |
unknown protein |
−4.1 |
3.7E-02 |
| AT3G54580 |
proline-rich extensin-like family protein, structural constituent of cell wall |
−5.0 |
4.8E-02 |
| AT5G54230 |
MYB DOMAIN PROTEIN 49 (MYB49) |
−5.0 |
4.1E-02 |
| AT2G28780 |
unknown protein |
−5.0 |
2.9E-02 |
| AT1G70830 |
Bet v I allergen family |
−5.2 |
3.9E-02 |
| AT2G02930 |
GLUTATHIONE S-TRANSFERASE F3 (ATGSTF3) |
−5.4 |
3.0E-02 |
| AT4G15390 |
acyl-transferase family protein |
−6.1 |
1.6E-02 |
| AT4G08780 |
peroxidase, putative |
−8.2 |
4.5E-02 |
| AT1G02930 |
GLUTATHIONE S-TRANSFERASE 6 (GSTF6) |
−8.6 |
4.3E-02 |
| AT2G36120 |
DEFECTIVELY ORGANIZED TRIBUTARIES 1 (DOT1) |
−8.8 |
3.5E-02 |
| AT1G19530 |
unknown protein |
−9.7 |
3.1E-02 |
| AT1G75830 |
LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 67 (LCR67) |
−9.9 |
1.5E-02 |
| AT2G26020 |
PLANT DEFENSIN 1.2B (PDF1.2b) |
−10.7 |
4.3E-02 |
| AT5G22490 |
Wax ester synthase homologue |
−11.5 |
4.5E-02 |
| AT5G44420 |
PLANT DEFENSIN 1.2 (PDF1.2) |
−13.1 |
3.9E-02 |
| AT2G26010 |
PLANT DEFENSIN 1.3 (PDF1.3) |
−16.2 |
4.4E-02 |
| AT4G16260 |
O-glycosyl hydrolase |
−17.9 |
4.9E-02 |
| AT5G44430 |
PLANT DEFENSIN 1.2C (PDF1.2c) |
−19.9 |
3.6E-02 |
| AT3G56700 | FATTY ACID REDUCTASE 6 (FAR6) | −55.4 | 7.8E-03 |
1Gene descriptions are abbreviated from TAIR10 genome release. Putative functions are stated in lowercase.
2Genes ranked according to fold-change values derived from log2 ratios of CSS (numerator) and OLD (denominator).
3 Derived from false discovery-rate correction of p-values.