Table 2. Statistics of molecular descriptors of natural products in UNPD and FDA-approved drugs in DrugBank.
Descriptors | Natural products in UNPD | Approved drugs | ||||||
Mean | Median | Min | Max | Mean | Median | Min | Max | |
AlogP | 2.788±3.352 | 2.710 | −36.007 | 53.473 | 1.899±2.814 | 2.164 | −12.834 | 14.242 |
Molecular_Weight | 472.6±265.7 | 406.5 | 16.0 | 3973.5 | 360.8±199.1 | 322.1445 | 6.9 | 1639.9 |
Num_Rotatable_Bonds | 6.6±6.8 | 5 | 0 | 140 | 5.5±4.9 | 4 | 0 | 44 |
Num_Rings | 3.7±2.4 | 3 | 0 | 32 | 2.7±1.6 | 3 | 0 | 10 |
Num_Aromatic_Rings | 0.9±1.3 | 0 | 0 | 20 | 1.3±1.1 | 1 | 0 | 8 |
Num_H_Acceptors | 7.5±6.7 | 6 | 0 | 104 | 5.2±4.2 | 4 | 0 | 51 |
Num_H_Donors | 3.4±4.1 | 2 | 0 | 64 | 2.3±2.6 | 2 | 0 | 23 |
Molecular_Volume | 323.8±172.5 | 278.5 | 19.2 | 2576.2 | 238.0±128.1 | 217.8 | 6.8 | 1053.3 |
Molecular_Surface_Area | 462.4±249.4 | 400.2 | 33 | 4020.9 | 347.7±186.4 | 312.45 | 16.6 | 1586.9 |
Molecular_Polar_Surface_Area | 122.2±110.6 | 87.0 | 0 | 1917.9 | 93.9±84.1 | 75.0 | 0 | 878.8 |
Molecular_Fractional_PolarSurfaceArea | 0.248±0.128 | 0.233 | 0 | 1 | 0.277±0.171 | 0.242 | 0 | 1 |
Molecular_SASA | 683.0±295.7 | 612.5 | 0 | 5106.7 | 563.7±232.6 | 523.3 | 137.9 | 2167.1 |
Molecular_PolarSASA | 194.9±169.3 | 142.1 | 0 | 3101.9 | 152.1±131.0 | 126.0 | 0 | 1321.8 |
Molecular_FractionalPolarSASA | 0.268±0.144 | 0.242 | 0 | 0.967 | 0.272±0.171 | 0.239 | 0 | 0.933 |
Molecular_SAVol | 591.7±253.7 | 531.5 | 0 | 4468.8 | 495.9±202.2 | 462.8 | 124.3 | 1900.9 |
Note: the descriptors of 197201 natural products in UNPD and 1380 FDA-approved small molecule drugs in DrugBank were calculated by Discovery Studio.