Table 2.
Selected differentially up- or downregulated genes in both regenerated (RO) liver and hepatomas (DO) from old liver whose expression levels were also reset to those seen in normal young (NY) liver (Fig. 1a, region I)
| Gene | Gene name | NY/NOa | DO/NOb | RO/NOb |
|---|---|---|---|---|
| Dixdc1 | DIX domain containing 1 | −2.9 | −2.7 | −3.4 |
| Ankk1 | Ankyrin repeat and kinase domain containing 1 | −3.0 | −2.3 | −3.2 |
| Esm1 | Endothelial cell-specific molecule 1 | −5.2 | −3.4 | −3.2 |
| Gpc2 | Glypican 2 | −3.7 | −3.6 | −3.1 |
| Rhobtb2 | Rho-related BTB domain containing 2 | −2.1 | −2.8 | −2.8 |
| Rpl28 | Ribosomal protein L28 | −2.9 | −3.3 | −2.7 |
| Dlx1 | Distal-less homeobox 1 | −2.7 | −2.4 | −2.6 |
| Mbtps2 | Membrane-bound transcription factor peptidase, site 2 | −2.5 | −2.2 | −2.6 |
| LACS | L-NAME induced actin cytoskeletal protein | −3.0 | −2.6 | −2.5 |
| RGD1565996 | Similar to DnaJ homolog subfamily B member 6 (Heat shock protein J2) | −2.8 | −3.0 | −2.5 |
| Tgm3 | Transglutaminase 3, E polypeptide | −3.1 | −3.5 | −2.5 |
| Olr1393 | Olfactory receptor 1393 | −2.1 | −2.2 | −2.4 |
| Scn5a | Sodium channel, voltage-gated, type V, alpha polypeptide | −3.3 | −2.3 | −2.1 |
| Eml4 | Echinoderm microtubule associated protein like 4 | 3.6 | 2.7 | 2.2 |
| Nrp1 | Neuropilin 1 | 2.4 | 2.5 | 2.4 |
| RGD1562100 | Similar to ADP-ribosylation factor interacting protein 2 (arfaptin 2) | 3.0 | 3.1 | 3.1 |
| Caskin1 | CASK-interacting protein 1 | 3.6 | 3.4 | 3.4 |
| Cap350 | Centrosome-associated protein 350 | 8.1 | 3.5 | 3.4 |
aFold change (FC) was calculated between the mean values of NO (normal old) and NY (normal young)
bFold change (FC) was calculated between the mean values of NO (normal old) and DO (hepatoma) as well as RO (regenerated)