Table 3A.
A | |||||||||||
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Nucleotide positions 5′→3′a |
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Gene | Strain/genetic variant | No. of isolate | 76 | 84 | 165 | 175 | 328 | GenBank accession number | Host | Country | Reference |
16S rRNA | A | 12 | G | A | A | A | A | JQ965530 | Roe deer | Poland | This study |
B | 8 | G | A | A | C | A | JQ965531 | Roe deer | Poland | This study | |
A. phagocytophilum strains pathogenic for human | A | G | A | C | T | JN107802 | Human | Poland | Welc-Falęciak et al. (2010) | ||
A | G | A | C | A | AY833407 | Human | Poland | Grzeszczuk et al. (2006) | |||
A | G | A | C | A | GU236658 | Human | Slovenia | Scharf et al. (2011) | |||
A | G | A | C | A | DQ029028 | Human | Italy | de la Fuente et al. (2005) | |||
— | — | G | C | A | GU908492 | Human | China | Li et al. (2010)b | |||
A | G | A | C | A | GU236664 | Human | USA | Scharf et al. (2011) |
The number corresponds to the positions of nucleotide substitutions relative to the sequence of the complete 16S rRNA gene of A. phagocytophilum strain HZ (NC_007797). Base substitutions are shown in bold.
Unpublished, sequence deposited in GenBank.