Table 3B.
Polymorphism in the Fragment of the 16S rRNA Gene (B) in A. phagocytophilum Isolates from Roe Deer and Human Pathogenic Strains (Sequences Published in GenBank)
| B | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| |
|
|
Nucleotide positions 5′→3′b |
|
|
|
|
||
| Gene | Strain/genetic variant | No. of isolates | 167 | 398 | 401 | GenBank accession number | Host | Country | Reference |
| groESL | C | 11 | G | G | A | JQ955735 | Roe deer | Poland | This study |
| D | 9 | G | A | A | JQ955734 | Roe deer | Poland | This study | |
| A. phagocytophilum strains pathogenic for human | A | A | A | AF033101 | Human | Slovenia | Petrovec et al. (1999) | ||
| G | A | G | JF494839 | Human | USA | Rejmanek et al. (2012) | |||
| G | A | G | EF473207 | Human | China | Zhang et al. (2007)b | |||
a
The number corresponds to the positions of nucleotide substitutions relative to the sequence of the groESL heat shock operon of the human pathogenic A. phagocytophilum strain (U96728). Base substitutions are shown in bold.
b
Unpublished, sequence deposited in GenBank.