Table 4.
BLASTX and Blast2GO results divided by isotig length
| All PUTs | < 501 | 501 – 1,000 | 1,001 – 1,999 | > 2,000 | |
|---|---|---|---|---|---|
| Number of PUTs |
170,859 |
106,296 |
42,760 |
19,589 |
2,214 |
| Total sequence [Mbp] |
96.5 |
35 |
26.4 |
29.7 |
5.4 |
| Hits with nr |
27.3% |
13.5% |
36.9% |
75.5% |
87.8% |
| Hits with ara |
19.6% |
7.9% |
25.1% |
64.4% |
82.6% |
| Hits with picea |
19.6% |
8.5% |
26.3% |
58.7% |
71.4% |
| Isotigs with assigned GO term | 23.2% | 11.9% | 26.6% | 63.9% | 82% |
Results of similarity searches with BLASTX and functional annotation using Blast2GO subdivided by transcript length in bp.