Table 2.
The overview annotation of contigs generated from control, aphid 2 h, aphid 24 h, whitefly 2 h, whitefly 24 h and super contigs with TAIR blast and cotton EST blast
| Conditions | Control | Aphid (2 h) | Aphid (24 h) | Whitefly (2 h) | Whitefly (24 h) | Super contigs |
|---|---|---|---|---|---|---|
| Total Contigs |
20249 |
19974 |
19307 |
23075 |
18330 |
14810 |
| Number of singletons |
73724 |
70696 |
70310 |
67162 |
72412 |
18315 |
| Average contig length |
546.99 |
516.62 |
511.26 |
559.03 |
512.68 |
684.43 |
|
TAIR blast |
|
|
|
|
|
|
| Matched contigs (no.) |
14548 |
13564 |
13062 |
16779 |
12780 |
7932 |
| Unmatched contigs(no.) |
5701 |
6410 |
6245 |
6296 |
5550 |
6878 |
|
Cotton EST blast |
|
|
|
|
|
|
| Matched contigs(no.) |
9402 |
9334 |
9177 |
10281 |
8748 |
14230 |
| Unmatched contigs(no.) | 10847 | 10640 | 10130 | 12794 | 9582 | 580 |