Table 4.
C. sinenseunigenes that share homology with flowering time genes
| Category | Gene ID | Homologous gene | Nr-ID |
|---|---|---|---|
| Photoperiod pathway |
CL636.Contig1_JX |
GI |
ADP92454.1 |
| |
CL8490.Contig1_JX |
ADP92454.1 |
|
| |
Unigene61105_JX |
ELF3 |
ABL11477.1 |
| |
Unigene61030_JX |
PIF3 |
NP_001063455.1 |
| |
Unigene31120_JX |
LHY |
ACF60466.1 |
| |
Unigene14045_JX |
CHS |
NP_001064831.1 |
| |
CL2407.Contig1_JX |
O23729.1 |
|
| |
Unigene68739_JX |
CCA1 |
ABW87009.1 |
| |
CL1617.Contig2_JX |
CO |
NP_001047975.1 |
| |
CL1617.Contig1_JX |
NP_001057441.1 |
|
| |
CL10349.Contig1_JX |
NP_001062363.2 |
|
| |
CL10838.Contig1_JX |
ADL36678.1 |
|
| Vernalization pathway |
Unigene49191_JX |
VRN2 |
ABD85301.1 |
| |
Unigene49192_JX |
ABD85301.1 |
|
| |
Unigene50102_JX |
ABD85301.1 |
|
| Floral integrator pathway |
Unigene4182_JX |
FT/HD3a |
ADI58462.1 |
| |
Unigene43540_JX |
ABX11019.1 |
|
| |
Unigene7817_JX |
CBY25182.1 |
|
| |
CL743.Contig1_JX |
ADP89470.1 |
|
| |
CL743.Contig2_JX |
ADP89470.1 |
|
| |
Unigene35813_JX |
TFL |
ACX53295.1 |
| |
Unigene36169_JX |
BAD02372.1 |
|
| |
CL11326.Contig1_JX |
AP2 |
ABB90554.1 |
| |
CL12341.Contig1_JX |
NP_001147356.1 |
|
| |
CL1488.Contig1_JX |
AAZ95247.1 |
|
| |
CL1700.Contig1_JX |
AAZ66389.1 |
|
| |
CL2122.Contig1_JX |
XP_002304138.1 |
|
| |
CL260.Contig1_JX |
XP_002274890.1 |
|
| |
CL260.Contig2_JX |
XP_002274890.1 |
|
| |
CL260.Contig3_JX |
XP_002274890.1 |
|
| |
CL260.Contig4_JX |
XP_002274890.1 |
|
| |
CL3589.Contig1_JX |
XP_002325111.1 |
|
| |
Unigene32766_JX |
SOC1 |
ADP06386.1 |
| |
Unigene59851_JX |
ADJ67241.1 |
|
| |
Unigene32196_JX |
BAC55080.1 |
|
| |
Unigene10614_JX |
ADJ67238.1 |
|
| |
Unigene59851_JX |
CAL |
ADJ67241.1 |
| |
Unigene10812_JX |
ADI58464.1 |
|
| Floral meristem identity |
Unigene32196_JX |
LFY |
BAC55080.1 |
| |
Unigene630_JX |
AAY40170.1 |
|
| |
Unigene2289_JX |
AP1 |
ADP00515.1 |
| |
CL162.Contig1_JX |
ADJ67240.1 |
|
| CL162.Contig2_JX | ADJ67240.1 |