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. 2013 Apr 29;8(4):e62085. doi: 10.1371/journal.pone.0062085

Figure 5. Phylogenetic analysis of HtP5CS, HtOAT and HtPDH.

Figure 5

Protein sequences which had been reported were selected for sequence alignment. Sequence alignment analysis was performed using the ClustalW method in the Meglign program (DNASTAR, Inc., Madison, WI, USA). These genes’ accession numbers are : AtP5CS1 (NM_129539) and AtP5CS2 (NM_115419.4) in Arabidopsis; OsP5CS1 (D49714.1) and OsP5CS2 (NM_001051337) in rice (Oryza sativa); PvP5CS1 (EU340347), PvP5CS2 (EU407263) in common bean (Phaseolus vulgaris); SbP5CS1(GQ377719) and SbP5CS2(GQ377720) in sorghum (Sorghum bicolor); AtOAT (NM_123987.3) in Arabidopsis; BnOAT (EU375566.1) in rapeseed (Brassica Napus); GmOAT (NM_001250221.1) in soybean (Glycine max); MtOAT (AJ278819) in alfalfa (Medicago truncatula); NtOAT (ADM47437) in tobacco (Nicotiana tabacum);AtPDH1 (NM_113981.5) and AtPDH2 (NM_123232.2) in Arabidopsis; MsPDH (AY556386.1) in alfalfa (Medicago sativa); NtPDH1 (AY639145.1) and NtPDH2 (AY639146.1) in tobacco (Nicotiana tabacum).