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. 2013 Apr;81(4):1040–1051. doi: 10.1128/IAI.01097-12

Table 1.

Oligonucleotide primers used in this study

Designation Sequence (5′→3′)a
ΔmucR-Up-For GCGGATCCGATGAAATAGGGCTGTTCGC
ΔmucR-Up-Rev GGTGCTTTCGTCGTTCGTT
ΔmucR-Down-For TGATTCTTCAGCGAGTGAATCACG
ΔmucR-Down-Rev GCCTGCAGCATTCCCAGCGATGTATGGG
mucR-comp-For CTCAATTTTCTTGCGGTGC
mucR-comp-Rev AGGCAGGACTGTCAGGAGAA
mucR-lacZ-For GCAAGCTTTTCTATAAATCATATTTGTCTTGG
mucR-lacZ-Rev GCGGATCCTTCCATAAGTTTTCCTTTT
rMucR-For GCGGTCTCCGCGCGAAAATCTGGAAACGAACGACGAAA
rMucR-Rev GCGGTCTCCTATCAGGCGTCCTTCGGCTTGCGG
babR-RT-For AAGAATTATGCGCATGACCT
babR-RT-Rev GTTCCCACCCATCTGGAAAT
BAB1_0746-RT-For AGGGAAGCAAAAGCGACATGT
BAB1_0746-RT-Rev AAAGCTAGACTGGTGCCGGTACG
BAB1_0747-RT-For CATGGAAACGTTTGGCAAATG
BAB1_0747-RT-Rev CTGAAGTTCACTGCAGCTGTAATGG
BAB1_1035-RT-For GTTCTTTGTCGGCTCCTTAACCTT
BAB1_1035-RT-Rev TCCGAAATCAAGATGCTTGAGG
BAB1_1605-RT-For TGGCAAAAGCTATTGATCTCAGCC
BAB1_1605-RT-Rev GGCGTGGTGTGGGACTCATATA
BAB1_1893-RT-For CATATGACCTGCCAGCCGC
BAB1_1893-RT-Rev CCTGGTCGTCGCATCCTATG
BAB1_2012-RT-For AACGGGAGAAACTTGTAAGGCAG
BAB1_2012-RT-Rev GCAGCCTATGGTGTTTGTAGCG
BAB1_2041-RT-For TCTTCTTCAGCCAGACATTCGAC
BAB1_2041-RT-Rev TCAGCAGGCCGGATGTAAGCT
BAB2_0143-RT-For GTTTTCTCGTTCCACTTCGCC
BAB2_0143-RT-Rev CGGGTACAACCACGCTTGAA
BAB2_0807-RT-For TGCTGGAGCTTGGTTTCAGG
BAB2_0807-RT-Rev GGTTGTCTTCCCGCAATTCC
BAB2_1072-RT-For GGTCGTGATCTTGTCCACCATAA
BAB2_1072-RT-Rev GACGATCGATTTGATGCTACGG
BAB1_0746-EMSA-For TTGAAATTGCCAACGAGCTTG
BAB1_0746-EMSA-Rev GCCTGTTATTTCTTCATGGTCGC
BAB1_1035-EMSA-For CGCCATAAAACGAACCTCA
BAB1_1035-EMSA-Rev CGTCGGCAGAAGTAATTTT
BAB1_1605-EMSA-For ATGATTTAGTAGAAAACGCAGA
BAB1_1605-EMSA-Rev TGGCCAGATGTTGTGAAAG
BAB1_1893-EMSA-For GCTGTCTTGTTCATTCTGTC
BAB1_1893-EMSA-Rev CGGAATCATCTGTACCACC
BAB2_0840-EMSA-For GCGGATCCGACAAAAATTGTTTAGAA
BAB2_0840-EMSA-Rev TAAGATCACTCTTTCAAAGGCGGCT
mucR-EMSA-For CTCAATTTTCTTGCGGTGCCCTG
mucR-EMSA-Rev CGCAGCGGCTGACAATGGCAA
a

Underlined sections indicate restriction endonuclease recognition sequences.