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. 2013 Apr 11;69(Pt 5):812–820. doi: 10.1107/S0907444913002102

Table 2. Structure and fluctuation differences between wild-type Salmonella FlhBC and its mutants during MD simulation shown by the key distance and angles defined by vectors V15 shown in Fig. 4(a).

D, length of V5. 12, 23, 34 and 14, angles defined between V1 and V2, V2 and V3, V3 and V4, and V1 and V4, respectively. 3 and 5, torsion angles defined by the sets of three vectors V2V3V4 (torsion around V3) and V1V5V4 (around V5), respectively. Averages and standard deviations over the last 20ns of MD are shown, with negative values shown in bold.

Protein D () 12 () 23 () 34 () 14 () 3 () 5 ()
Salmonella FlhBC
Wild type 37.2 3.9 96.0 21.9 53.8 19.4 105.5 2.2 77.1 38.3 83.8 23.5 103.8 44.8
(281285) 36.9 0.7 133.2 11.7 64.1 5.2 108.2 1.7 34.0 9.5 23.1 7.9 168.3 21.0
AAAAA281285 38.1 1.5 113.3 34.6 45.7 6.1 113.2 1.8 47.9 35.4 30.3 11.6 175.5 43.6
PPPPP281285 36.6 3.1 69.6 37.1 51.4 12.2 112.9 2.4 59.2 26.9 77.3 18.9 165.4 43.1