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. 2011 Aug 16;23(1):1–7. doi: 10.1089/hgtb.2011.104

Table 1.

qPCR Primers Used in Titration Assays

Target vector Primer label Primer distance from the hairpin (bp) Primer sequence
scAAV-LP1-hFIXco Set 1 41 Forward: ATTTTATGTTTCAGGTTCAGGGGGAGGTG
Reverse: GCGCAGAGAGGGAGTGGACTAGT
  Set 2 162 Forward: TGTGAACTGGATCAAGGAGAAG
Reverse: AAGCAATAGCATCACAAATTTCA
  Set 3 1204 Forward: CATGGAGGAGAAGTGCAGCTTTGA
Reverse: ATGTTGCAGGTCACATCCAGCTCA
  Set 4 1154 Forward: GCAGCTGCAAGGATGACATCAACA
Reverse: GCAGAACTGCTCACATCTGCCATT
  Set 5 2014 Forward: GCAAGCAGCAAACAGCAAACACAC
Reverse: TGCTCCTCTCCACCGAAATTCCAA
scAAV-LP1-PPCA Set 6 320 Forward: TGGAGATGTAGACATGGCCTGCAA
Reverse: TGAGAAAGGCGATGTGGGAGAACT
  Set 7 1015 Forward: ATTTCTTCCGCCTCTTTCCGGAGT
Reverse: ACCAGGGAGTTGTCATTCTGCTCA
  Set 5 2092 Forward: GCAAGCAGCAAACAGCAAACACAC
Reverse: TGCTCCTCTCCACCGAAATTCCAA
scAAV-LP1-Cre Set 8 567 Forward: ACGTACTGACGGTGGGAGAATGTT
Reverse: AGCTACACCAGAGACGGAAATCCA
  Set 9 1197 Forward: TGCCCAAGAAGAAGAGGAAGGTGT
Reverse: ATCACTCGTTGCATCGACCGGTAA
  Set 5 1702 Forward: GCAAGCAGCAAACAGCAAACACAC
Reverse: TGCTCCTCTCCACCGAAATTCCAA
scAAV-LP1-GFP Set 10 445 Forward: TCTTCTTCAAGGACGACGGCAACT
Reverse: TTCACCTTGATGCCGTTCTTCTGC
  Set 5 1395 Forward: GCAAGCAGCAAACAGCAAACACAC
Reverse: TGCTCCTCTCCACCGAAATTCCAA