Table 5.
Tribe members selected for expression profiling during PST infection of wheat
| Tribe no. | Tribe ranking | No. of proteins | Average protein length (amino acids) | Species distribution (No. of proteins) | No. of proteins in top 100 expressed during infection | No. of proteins in top 100 expressed in haustoria | Members assessed for peak in expression | General effector features (No. of proteins) |
|---|---|---|---|---|---|---|---|---|
| 63 |
2 |
13 |
180 |
PST (2), PGT (5), Mel (6) |
2 |
2 |
1 dpi (1) |
Similarity to M. lini hesp-C49 (10); Internal repeats (2); Members encoded by genes with 1 FIR ≥10Kb (2); Without PFAM annotation (11) |
| 467 |
3 |
3 |
109 |
PST |
0 |
3 |
14 dpi (1) |
SCRs (3); Without PFAM annotation (3) |
| 238 |
10 |
5 |
112 |
PST |
0 |
5 |
14 dpi (2) |
Internal repeats (2) |
| 413 |
12 |
3 |
95 |
PST (2), PGT (1) |
1 |
2 |
14 dpi (2) |
Y/F/WxC (2); SCRs (3); Without PFAM annotation (1) |
| 276 |
13 |
4 |
288.5 |
PST (2), PGT (1), Mel (1) |
0 |
2 |
1 dpi (1) |
Similarity to M. lini hesp-735 (3) and hesp-379 (1); Internal repeats (1); Without PFAM annotation (1) |
| 351 |
22 |
4 |
276.5 |
PST (3), PGT (1) |
0 |
3 |
14 dpi (1) |
Internal repeats (2); Without PFAM annotation (2) |
| 317 |
25 |
4 |
209.5 |
PST (3), PGT (1) |
0 |
3 |
1 dpi (1) |
- |
| 308 |
28 |
4 |
145 |
PST |
0 |
3 |
1 dpi (1) |
SCRs (3); Without PFAM annotation (3) |
| 596 |
31 |
2 |
139 |
PST |
0 |
2 |
1 dpi (1) |
Without PFAM annotation (2) |
| 79 |
34 |
12 |
299.5 |
PST (8), PGT (1), Mel (3) |
0 |
4 |
Stable (1) |
Y/F/WxC (2), LIAR (1); Members encoded by genes with 1 FIR ≥10Kb (1); Without PFAM annotation (2) |
| 928 |
43 |
1 |
163 |
PST |
1 |
1 |
6 dpi (1) |
Y/F/WxC (1); Without PFAM annotation (1) |
| 1004 |
43 |
1 |
132 |
PST |
1 |
1 |
6 dpi (1) |
Without PFAM annotation (1) |
| 593 |
60 |
2 |
160 |
PST |
0 |
1 |
1 dpi (1) |
Without PFAM annotation (1) |
| 544 |
75 |
2 |
216 |
PST (1), PGT (1) |
0 |
1 |
6 dpi (1) |
SCRs (1); Internal repeats (1); Without PFAM annotation (2) |
| 1232 |
78 |
1 |
163 |
PST |
0 |
1 |
14 dpi (1) |
Without PFAM annotation (1) |
| 1118 |
96 |
1 |
201 |
PST |
0 |
1 |
6 dpi (1) |
LIAR (1) |
| 426 |
133 |
3 |
142 |
PST |
1 |
1 |
14 dpi (1) |
Without PFAM annotation (1) |
| 6 | 154 | 49 | 224 | PST (27), PGT (21), Mel (1) | 0 | 4 | 1 dpi (2), 14 dpi (1) | Y/F/WxC (1), LIAR (2), RXLR (1); Without PFAM annotation (31) |
dpi, days post-inoculation.