Table IV. Representation of marker genes for mitochondrial stress response and organellar dysfunction.
Sample | Changes versus Wild-Type HL | Present in Category | Observed Differential to Wild-Type HL | Expected Differential to Wild-Type HL | P | Ratio obs-exp |
---|---|---|---|---|---|---|
Mitochondrial stress response genes | ||||||
wrky40 HL | 4,239 | 26 | 17 | 6.5 | <0.001 | 2.6 |
WRKY40 OE1 HL | 805 | 26 | 7 | 1.2 | <0.001 | 5.7 |
wrky63 HL | 253 | 26 | 2 | 0.4 | <0.01 | 5.2 |
WRKY63 OE1 HL | 1,688 | 26 | 13 | 2.6 | <0.001 | 5.0 |
Mitochondrial and chloroplast dysfunction | ||||||
wrky40 HL | 4,239 | 13 | 10 | 3.2 | <0.001 | 3.1 |
WRKY40 OE1 HL | 805 | 13 | 3 | 0.6 | <0.001 | 4.9 |
wrky63 HL | 253 | 13 | 2 | 0.2 | <0.001 | 10.3 |
WRKY63 OE1 HL | 1,688 | 13 | 7 | 1.3 | <0.001 | 5.4 |
Mitochondrial dysfunction only | ||||||
wrky40 HL | 4,239 | 12 | 3 | 3.0 | <0.05 | 1.0 |
WRKY40 OE1 HL | 805 | 12 | 1 | 0.6 | <0.05 | 1.8 |
wrky63 HL | 253 | 12 | 3 | 0.2 | <0.001 | 16.8 |
WRKY63 OE1 HL | 1,688 | 12 | 1 | 1.2 | <0.05 | 0.8 |
Chloroplast dysfunction only | ||||||
wrky40 HL | 4,239 | 14 | 3 | 3.5 | <0.05 | 0.9 |
WRKY40 OE1 HL | 805 | 14 | 2 | 0.7 | <0.05 | 3.0 |
wrky63 HL | 253 | 14 | 0 | 0.2 | <0.05 | 0.0 |
WRKY63 OE1 HL | 1,688 | 14 | 1 | 1.4 | <0.05 | 0.7 |