Table 2.
Feature | GeneSetDB | ConceptGen [9] | DAVID [10] | MSigDB [13] | WhichGenes [14] |
---|---|---|---|---|---|
Pathway database # | 9 | 3 | 6 | 7 | 3 |
Disease/Phenotype database # | 7 | 1 | 2 | 2a | 4 |
Drug/Chemical database # | 5 | 1 | 0 | 1a | 1 |
Whole data downloadable | Yes | No | Yes | Yes | No |
Making of original gene set | Yes | No | No | Yes | Yes |
Gene/gene set intersection map | No | Yes | Yes | Yes | No |
Gene set/gene set intersection map | Yes | No | No | No | No |
Organismsb | Hs, Mm, Rn | Hs, Mm, Rn | Over 65 000 species | Dr, Hs, Mm, Mmu, Rn | Hs, Mm |
Including original curated datasets.
Dr: Danio rerio, Hs: Homo sapiens, Mm: Mus musculus, Mmu: Macaca mulatta, Rn: Rattus norvegicus.