Table III.
SNP Information and Single Point Association Analyses with Major Phenotypes
# | db SNP ID | position* | Type | MAF | Risk Allele | AD | ND | CD | MDD | ASPD |
---|---|---|---|---|---|---|---|---|---|---|
1 | rs490434 | 1 | AG | 0.45 | G | <0.06 | <0.06 | <0.06 | <0.37 | <0.67 |
2 | rs576666 | 9097 | GT | 0.44 | G | <0.05 | <0.03 | <0.02 | <0.49 | <0.74 |
3 | rs531460 | 17929 | AG | 0.43 | G | <0.1 | <0.02 | <0.05 | <0.56 | <0.68 |
4 | rs561779 | 46441 | CT | 0.45 | C | <0.04 | <0.02 | <0.02 | <0.42 | <0.63 |
5 | rs495818 | 55558 | AG | 0.44 | A | <0.04 | <0.03 | <0.02 | <0.47 | <0.73 |
6 | rs572227 | 59073 | AG | 0.44 | G | <0.05 | <0.02 | <0.02 | <0.48 | <0.73 |
7 | rs573400 | 59746 | AG | 0.44 | A | <0.05 | <0.03 | <0.02 | <0.45 | <0.71 |
8 | rs481311 | 62062 | AT | 0.45 | A | <0.04 | <0.05 | <0.03 | <0.46 | <0.5 |
9 | rs507788 | 65138 | AG | 0.45 | A | <0.03 | <0.02 | <0.03 | <0.39 | <0.57 |
10 | rs532780 | 69046 | CT | 0.45 | T | <0.03 | <0.01 | <0.03 | <0.48 | <0.57 |
11 | rs548583 | 71024 | CT | 0.46 | C | <0.04 | <0.02 | <0.02 | <0.43 | <0.52 |
12 | rs496650 | 72066 | GT | 0.46 | T | <0.03 | <0.05 | <0.02 | <0.26 | <0.35 |
13 | rs526752 | 84262 | AG | 0.45 | A | <0.03 | <0.01 | <0.03 | <0.36 | <0.5 |
14 | rs530329 | 88752 | CT | 0.45 | T | <0.03 | <0.02 | <0.03 | <0.36 | <0.56 |
15 | rs483160 | 94706 | AC | 0.46 | C | <0.03 | <0.01 | <0.04 | <0.48 | <0.51 |
16 | rs279871 | 113365 | AG | 0.47 | A | <0.04 | <0.01 | <0.02 | <0.33 | <0.5 |
17 | rs279869 | 115627 | AC | 0.47 | C | <0.03 | <0.05 | <0.01 | <0.3 | <0.28 |
18 | rs279867 | 115935 | GT | 0.47 | T | <0.03 | <0.03 | <0.02 | <0.35 | <0.38 |
19 | rs279866 | 117396 | AG | 0.47 | A | <0.04 | <0.02 | <0.01 | <0.43 | <0.37 |
20 | rs1808851 | 119078 | AG | 0.46 | A | <0.03 | <0.02 | <0.01 | <0.33 | <0.51 |
21 | rs279861 | 120956 | CT | 0.47 | G | <0.05 | <0.02 | <0.02 | <0.51 | <0.55 |
22 | rs279858 | 122224 | AG | 0.46 | A | <0.05 | <0.02 | <0.03 | <0.44 | <0.65 |
23 | rs279843 | 132837 | CT | 0.46 | C | <0.05 | <0.04 | <0.04 | <0.51 | <0.4 |
24 | rs279845 | 137355 | AT | 0.47 | T | <0.04 | <0.1 | <0.05 | <0.78 | <0.37 |
25 | rs183961 | 138660 | CT | 0.46 | T | <0.04 | <0.09 | <0.06 | <0.9 | <0.57 |
26 | rs1440130 | 140885 | CT | 0.47 | T | <0.05 | <0.09 | <0.07 | <0.86 | <0.5 |
27 | rs279826 | 141841 | AG | 0.48 | A | <0.04 | <0.13 | <0.06 | <0.62 | <0.39 |
28 | rs11503016 | 142126 | AT | 0.12 | A | <0.12 | <0.17 | <0.14 | <0.16 | <0.05 |
29 | rs279827 | 142334 | AG | 0.48 | A | <0.05 | <0.1 | <0.08 | <0.69 | <0.53 |
30 | rs279828 | 142442 | AC | 0.47 | A | <0.04 | <0.11 | <0.07 | <0.74 | <0.55 |
31 | rs279834 | 145931 | CG | 0.45 | G | <0.04 | <0.07 | <0.03 | <0.84 | <0.63 |
32 | rs279837 | 146955 | AG | 0.45 | A | <0.05 | <0.06 | <0.03 | <0.98 | <0.54 |
33 | rs279841 | 148395 | AG | 0.45 | G | <0.03 | <0.04 | <0.02 | <0.81 | <0.57 |
34 | rs189957 | 154315 | AG | 0.48 | A | <0.04 | <0.23 | <0.1 | <0.91 | <0.38 |
35 | rs1442059 | 164589 | CT | 0.45 | T | <0.03 | <0.06 | <0.03 | <0.79 | <0.74 |
36 | rs1442061 | 178858 | CG | 0.27 | <0.08 | <0.47 | <0.48 | <0.5 | <0.68 | |
37 | rs11503014 | 198491 | CG | 0.32 | <0.66 | <0.22 | <0.77 | <0.45 | <0.2 | |
38 | rs2165607 | 207847 | CG | 0.07 | <0.85 | <0.82 | <0.52 | <0.52 | <0.69 | |
39 | rs1545234 | 212039 | AG | 0.32 | A | <0.1 | <0.01 | <0.86 | <0.76 | <0.33 |
All SNP positions are given relative to rs rs490434 whose position in NCBI Build 36.2 is bp 45888036.
All values are nominal. For each SNP, the risk allele is constant in all significant comparisons.