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. Author manuscript; available in PMC: 2013 May 3.
Published in final edited form as: Psychiatr Genet. 2009 Apr;19(2):91–98. doi: 10.1097/YPG.0b013e3283208026

Table III.

SNP Information and Single Point Association Analyses with Major Phenotypes

# db SNP ID position* Type MAF Risk Allele AD ND CD MDD ASPD
1 rs490434 1 AG 0.45 G <0.06 <0.06 <0.06 <0.37 <0.67
2 rs576666 9097 GT 0.44 G <0.05 <0.03 <0.02 <0.49 <0.74
3 rs531460 17929 AG 0.43 G <0.1 <0.02 <0.05 <0.56 <0.68
4 rs561779 46441 CT 0.45 C <0.04 <0.02 <0.02 <0.42 <0.63
5 rs495818 55558 AG 0.44 A <0.04 <0.03 <0.02 <0.47 <0.73
6 rs572227 59073 AG 0.44 G <0.05 <0.02 <0.02 <0.48 <0.73
7 rs573400 59746 AG 0.44 A <0.05 <0.03 <0.02 <0.45 <0.71
8 rs481311 62062 AT 0.45 A <0.04 <0.05 <0.03 <0.46 <0.5
9 rs507788 65138 AG 0.45 A <0.03 <0.02 <0.03 <0.39 <0.57
10 rs532780 69046 CT 0.45 T <0.03 <0.01 <0.03 <0.48 <0.57
11 rs548583 71024 CT 0.46 C <0.04 <0.02 <0.02 <0.43 <0.52
12 rs496650 72066 GT 0.46 T <0.03 <0.05 <0.02 <0.26 <0.35
13 rs526752 84262 AG 0.45 A <0.03 <0.01 <0.03 <0.36 <0.5
14 rs530329 88752 CT 0.45 T <0.03 <0.02 <0.03 <0.36 <0.56
15 rs483160 94706 AC 0.46 C <0.03 <0.01 <0.04 <0.48 <0.51
16 rs279871 113365 AG 0.47 A <0.04 <0.01 <0.02 <0.33 <0.5
17 rs279869 115627 AC 0.47 C <0.03 <0.05 <0.01 <0.3 <0.28
18 rs279867 115935 GT 0.47 T <0.03 <0.03 <0.02 <0.35 <0.38
19 rs279866 117396 AG 0.47 A <0.04 <0.02 <0.01 <0.43 <0.37
20 rs1808851 119078 AG 0.46 A <0.03 <0.02 <0.01 <0.33 <0.51
21 rs279861 120956 CT 0.47 G <0.05 <0.02 <0.02 <0.51 <0.55
22 rs279858 122224 AG 0.46 A <0.05 <0.02 <0.03 <0.44 <0.65
23 rs279843 132837 CT 0.46 C <0.05 <0.04 <0.04 <0.51 <0.4
24 rs279845 137355 AT 0.47 T <0.04 <0.1 <0.05 <0.78 <0.37
25 rs183961 138660 CT 0.46 T <0.04 <0.09 <0.06 <0.9 <0.57
26 rs1440130 140885 CT 0.47 T <0.05 <0.09 <0.07 <0.86 <0.5
27 rs279826 141841 AG 0.48 A <0.04 <0.13 <0.06 <0.62 <0.39
28 rs11503016 142126 AT 0.12 A <0.12 <0.17 <0.14 <0.16 <0.05
29 rs279827 142334 AG 0.48 A <0.05 <0.1 <0.08 <0.69 <0.53
30 rs279828 142442 AC 0.47 A <0.04 <0.11 <0.07 <0.74 <0.55
31 rs279834 145931 CG 0.45 G <0.04 <0.07 <0.03 <0.84 <0.63
32 rs279837 146955 AG 0.45 A <0.05 <0.06 <0.03 <0.98 <0.54
33 rs279841 148395 AG 0.45 G <0.03 <0.04 <0.02 <0.81 <0.57
34 rs189957 154315 AG 0.48 A <0.04 <0.23 <0.1 <0.91 <0.38
35 rs1442059 164589 CT 0.45 T <0.03 <0.06 <0.03 <0.79 <0.74
36 rs1442061 178858 CG 0.27 <0.08 <0.47 <0.48 <0.5 <0.68
37 rs11503014 198491 CG 0.32 <0.66 <0.22 <0.77 <0.45 <0.2
38 rs2165607 207847 CG 0.07 <0.85 <0.82 <0.52 <0.52 <0.69
39 rs1545234 212039 AG 0.32 A <0.1 <0.01 <0.86 <0.76 <0.33
*

All SNP positions are given relative to rs rs490434 whose position in NCBI Build 36.2 is bp 45888036.

All values are nominal. For each SNP, the risk allele is constant in all significant comparisons.

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