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. 2013 May 3;8(5):e62799. doi: 10.1371/journal.pone.0062799

Figure 3. Phylogeny of rRNA gene sequences.

Figure 3

The longest rRNA consensus sequence assembled from the Neanderthal data and assigned to Streptmycetales is shown in red (SSU_Streptomycetales C11). The rRNA gene sequences amplified from the cave sediment are shown in green colour. Streptomyces coelicolor, used as a reference in the alignment is shown in blue. The PCR-amplified sequences from the cave sediment are shown in green. “ACT primers clone A5_G07” refer to amplifications with the actinobacterial-specific primers, while the four sequences obtained from the universal primers 27f and 1492r are referred to as “universal primers clone u2_C02, 05, 08 and 09″. The phylogeny was inferred using the maximum likelihood method. Numbers refer to bootstrap support values higher than 75%.