Table 1.
Bacterial strains and plasmids
Strains, plasmids or primers | Genotype or description | Reference or source |
---|---|---|
E. coli |
|
|
DH5αλ pir |
φ80dlacZΔM15 Δ(lacZYA-argF)U169 recA1 endA1 gyrA96 thi-1 hsdR17 supE44 relA1 deoR λpir |
[19] |
P. fluorescens |
|
|
Pf0-1 |
Wild type, Ampr |
[20] |
PfΔdap |
Pf0-1 ΔdapB |
This Study |
Pf0-1::pKNOCK Fr2 |
Pf0-1 with partial deletion of Fr2 |
This Study |
Pf0-1::pKNOCK Fr4 |
Pf0-1 with partial deletion of Fr4 |
This Study |
Pf0-1::pKNOCK Fr9 |
Pf0-1 with partial deletion of Fr9 |
This Study |
Pf0-1::pKNOCK Fr10 |
Pf0-1 with partial deletion of Fr10 |
This Study |
Pf0-1::pKNOCK Fr2pJB |
Pf0-1 with partial deletion of Fr2 carrying pJB866 |
This Study |
Pf0-1::pKNOCK Fr2pJB Fr2 |
Pf0-1 with partial deletion of Fr2 Complemented by pJB866::Fr2 |
This Study |
Pf0-1::pKNOCK Fr10pJB |
Pf0-1 with partial deletion of Fr10 carrying pJB866 |
This Study |
Pf0-1::pKNOCK Fr10pJB Fr10 |
Pf0-1 with partial deletion of Fr10 Complemented by pJB866::Fr10 |
This Study |
Plasmids |
|
|
pGEM-T Easy |
Apr; cloning vector for PCR products |
Promega |
pIVETdap |
dapB’ cloned in SpeI site of pUIC3 |
[11] |
pJB866 |
Broad-host-range vector, Tcr |
[21] |
pRK2013 |
Helper plasmid, IncP Tra+ Mob+ ColE1, Kmr |
[21] |
pKNOCK-Km |
pBSL63 derivative carrying RP4 oriT and R6K γ-ori, Kmr |
[22] |
pSR47s | Kmr; sacB-containing suicide vector (requiring R6K replication origin) | [23] |