Table 5. Summary of female-specific novel miRNAs.
Name | Sequence (5-3) | LP | MFE | miRNA location | miRNA reads | miR*reads | ||
Pto-F18 | TTGGTTAAACTCCCATCAGGA | 133 | −65.6 | chr1∶7117690–7117710 | 126 | NO | ||
Pto-F19 | CTCAGATTAGCCAGGTGCCT | 117 | −44.3 | chr1∶10983482–10983501 | 105 | NO | ||
Pto-F20 | TTATTAAACCCGGACCGGCCT | 122 | −54.62 | chr1∶18312617–18312637 | 126 | NO | ||
Pto-F21 | TACCCGGTTACTGTGCATGTGC | 76 | −33.3 | chr1∶38996098–38996119 | 126 | NO | ||
Pto-F22 | TATCCTTGGATCTGACGACCA | 220 | −123.4 | chr1∶39819960–39819980 | 294 | NO | ||
Pto-F23 | TTTTCGATCCAAGCTTCGGGT | 80 | −27.1 | chr1∶42987729–42987749 | 105 | NO | ||
Pto-F24 | TTACTTCCTTTTGTCCCTCTC | 303 | −177.4 | chr2∶1282957–1282977 | 357 | NO | ||
Pto-F25 | TATAGATTGCAGAGGGAACC | 203 | −71.04 | chr2∶12233873–12233892 | 126 | NO | ||
Pto-F26 | TTATTAAACCCGGACCGGCCT | 78 | −42.8 | chr2∶19952785–19952805 | 126 | NO | ||
Pto-F27 | TCCGAGCTCTAATTATGTGGG | 182 | −92 | chr2∶21648214–21648234 | 798 | NO | ||
Pto-F28 | TTGGGCTGGCAGTTGTGATGAC | 161 | −45.87 | chr3∶19076220–19076241 | 231 | NO | ||
Pto-F29 | TTCCGGTTTTTGGGACTCCGAT | 103 | −35.1 | chr4∶20319258–20319279 | 105 | NO | ||
Pto-F30 | TTCTTTCCTATCAAACTTCAAC | 191 | −92.4 | chr4∶22210258–22210279 | 105 | NO | ||
Pto-F31 | TGAAGATAAGAGCTTGTTTGG | 169 | −75.86 | chr5∶6548077–6548097 | 651 | NO | ||
Pto-F32 | TTTGCACGTAGAATTCAGGATT | 139 | −38 | chr5∶18398103–18398124 | 588 | NO | ||
Pto-F33 | ATGGATTGATGAAGATGAGGA | 92 | −26.3 | chr5∶21111319–21111339 | 105 | NO | ||
Pto-F34 | TTATTTCCTCAAACTTTCCTC | 256 | −159.8 | chr5∶24262419–24262439 | 273 | NO | ||
Pto-F35 | TAGAACCTGACCAGTTGAGCT | 116 | −30 | chr6∶2313141–2313161 | 105 | NO | ||
Pto-F36 | TGGCCCATGATCTTCATTGTG | 115 | −78.02 | chr6∶6767559–6767579 | 357 | YES | ||
Pto-F37 | TTTTTGTTGTTTAAGAACCCT | 301 | −128.6 | chr6∶21307737–21307757 | 315 | NO | ||
Pto-F38 | TTGGGCTGGCAGTTGTGATGAC | 161 | −46.2 | chr7∶301518–301539 | 231 | NO | ||
Pto-F39 | TGTGGGACTCGAATTAGTGAT | 96 | −26.43 | chr7∶13307862–13307882 | 147 | NO | ||
Pto-F40a | GAGGAGGGAGAGAGATCTGT | 136 | −38.3 | chr8∶5498368–5498387 | 126 | NO | ||
Pto-F40b | GAGGAGGGAGAGAGATCTGT | 114 | −34.3 | chr8∶5522852–5522871 | 126 | NO | ||
Pto-F41 | ATCCAACGGTTAGATCTCCCT | 296 | −162.7 | chr8∶8443078–8443098 | 105 | NO | ||
Pto-F42 | CTTGAAACAATGTTTGGTGCAG | 121 | −31.9 | chr8∶10699331–10699352 | 105 | NO | ||
Pto-F43 | TAGAGTATAAGAGGATCGACT | 124 | −32.4 | chr8∶15869891–15869911 | 147 | NO | ||
Pto-F44 | ACTTTGACCTGAACTTGCCC | 79 | −40 | chr9∶8255922–8255941 | 105 | NO | ||
Pto-F45 | TGTCCTGACTCGAACTCGAGA | 82 | −21.2 | chr10∶7102937–7102957 | 189 | NO | ||
Pto-F46 | TGAAGATAAGAGCTTGTTTGG | 169 | −77.06 | chr10∶7227906–7227926 | 651 | NO | ||
Pto-F47 | GGGACTGCTGTAGATGCTTGG | 90 | −34.7 | chr10∶13462743–13462763 | 105 | NO | ||
Pto-F48 | TTGATGACTGATCTTGAGCAT | 99 | −62.8 | chr10∶16376128–16376148 | 189 | YES | ||
Pto-F49 | TTGTAAGAGCCTGAGACAGCC | 143 | −51.8 | chr10∶18334850–18334870 | 714 | NO | ||
Pto-F50 | TTTAATTTCCTCCAATATCTCA | 169 | −45.91 | chr10∶20020296–20020317 | 399 | NO | ||
Pto-F51 | TTGGAATCCTCTCTGATAATGC | 105 | −30.5 | chr10∶20322598–20322619 | 105 | NO | ||
Pto-F52 | TTTAGGACCCGTGGGATTAGTC | 102 | −27 | chr11∶8039096–8039117 | 189 | NO | ||
Pto-F53 | TCAATGGGTAAAAATTCTGACC | 96 | −24.4 | chr12∶3834076–3834097 | 126 | NO | ||
Pto-F54 | TTGGAGCTCGAGACTTGGCAC | 90 | −25.74 | chr13∶1347925–1347945 | 105 | NO | ||
Pto-F55 | ATCACTGTGTCTATTAGGATGG | 82 | −28.1 | chr13∶6333415–6333436 | 105 | NO | ||
Pto-F56 | TGCTAGGACCAAGTTTTCTGG | 103 | −53.34 | chr13∶9970875–9970895 | 609 | YES | ||
Pto-F57 | TTCAGGACCTGTAGAATTAGTC | 92 | −24.2 | chr13∶12124499–12124520 | 105 | NO | ||
Pto-F58a | TGAATGGCTGTTGAACTTGGC | 156 | −49.5 | chr14∶293794–293814 | 168 | NO | ||
Pto-F58b | TGAATGGCTGTTGAACTTGGC | 158 | −45.51 | chr14∶726835–726855 | 168 | NO | ||
Pto-F58c | TGAATGGCTGTTGAACTTGGC | 158 | −52.6 | chr14∶1080042–1080062 | 168 | NO | ||
Pto-F59 | TGATGGGTCTCATTTAGTAGA | 215 | −86.36 | chr14∶5877228–5877248 | 441 | NO | ||
Pto-F60 | AACCGAACCGAACTGAACCGA | 98 | −33.4 | chr14∶16267732–16267752 | 105 | NO | ||
Pto-F61 | TTATAGTTTTGAAATCCGGCC | 95 | −47.2 | chr15∶5715046–5715066 | 147 | NO | ||
Pto-F62 | AACCCAAGAACTCAACTCTGT | 171 | −68.37 | chr15∶6997081–6997101 | 126 | NO | ||
Pto-F63 | GTACGATCCTATAGAACAGAT | 116 | −34.5 | chr15∶15015652–15015672 | 189 | YES | ||
Pto-F64 | CAACACCAGACCCAAGAGCTT | 117 | −44.51 | chr16∶5544896–5544916 | 210 | NO | ||
Pto-F65 | TTAGGGTTTAGGGTTTAGAA | 157 | −41.6 | chr17∶210550–210569 | 126 | NO | ||
Pto-F66 | TCGAGATTGTACTGTTCATA | 77 | −23.6 | chr17∶4120360–4120379 | 105 | NO | ||
Pto-F67 | TGGCAAATGATCTGCATCTGC | 90 | −24.52 | chr17∶13666346–13666366 | 105 | NO | ||
Pto-F68 | GTGGGTGGGTCTGGGTGGCA | 118 | −47.7 | chr18∶10507789–10507808 | 147 | NO | ||
Pto-F69 | TTTGCTCTTCGTTTTCTCATG | 170 | −77.8 | chr18∶14336738–14336758 | 294 | NO | ||
Pto-F70 | TTTTATTCCTGACTCTGGCATC | 166 | −43.31 | chr19∶907650–907671 | 126 | NO | ||
Pto-F71 | TTGGGAATTATTACAATGGCA | 106 | −31.8 | chr19∶1460855–1460875 | 147 | NO | ||
Pto-F72 | TTATTAAACCCGGACCGGCCT | 87 | −39.6 | chr19∶2013039–2013059 | 126 | NO | ||
Pto-F73 | TGTTTTCCGGAAAGTAGTTTC | 99 | −27.1 | chr19∶8890465–8890485 | 378 | NO | ||
Pto-F74 | TAGGGCAGAGAATTGAATGACT | 119 | −45.4 | chr19∶10646670–10646691 | 252 | NO | ||
Pto-F75 | TCGAGATTTCTTTGTTGGAGCT | 125 | −42.72 | scaffold_1233∶2309–2330 | 126 | NO | ||
Pto-F76 | TCGGCGTTGATGTAGAATGGC | 153 | −53.1 | scaffold_401∶10122–10142 | 126 | NO | ||
Pto-F77 | TTTTGAGACAATGCTGAAAAT | 99 | −28.4 | scaffold_65∶42511–42531 | 1953 | NO | ||
Pto-F78 | ACATGAAACGGCGTCGTTTTG | 91 | −26 | scaffold_76∶39681–39701 | 126 | NO |