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. 2013 May 7;8(5):e62882. doi: 10.1371/journal.pone.0062882

Table 1. Direct target genes of LIN9 in ES cells as determined by microarray and ChIP-on-chip.

Gene name Direction Gene Description
2900011O08Rik down RIKEN cDNA 2900011O08 gene
3300002I08Rik up RIKEN cDNA 3300002I08 gene
4930547N16Rik down RIKEN cDNA 4930547N16 gene
A430089I19Rik up RIKEN cDNA A430089I19 gene
A530032D15Rik up Sp140 nuclear body protein
Acpp up acid phosphatase, prostate
Aspm down asp (abnormal spindle)-like, microcephaly associated (Drosophila)
Aurka down aurora kinase A
BC028528 up cDNA sequence BC028528
Bub3 down budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae)
Ccnb1 down cyclin B1
Cdc20 down cell division cycle 20 homolog (S. cerevisiae)
Cdca2 down cell division cycle associated 2
Cenpa down centromere protein A
Cenpe down centromere protein E
Cpne8 up copine VIII
Ctss up cathepsin S
Cyp2d26 down cytochrome P450, family 2, subfamily d, polypeptide 26
D17H6S56E-5 down DNA segment, Chr 17, human D6S56E 5
Depdc1b down DEP domain containing 1B
Dst up dystonin
Fbp2 up fructose bisphosphatase 2
Gas2l3 down growth arrest-specific 2 like 3
Gm9 down predicted gene 9
Grn down granulin
H1f0 down H1 histone family, member 0
Hist1h2bc down histone cluster 1, H2bc
Hmga2 up high mobility group AT-hook 2
Hmmr down hyaluronan mediated motility receptor (RHAMM)
Igfbp7 up insulin-like growth factor binding protein 7
Incenp down inner centromere protein
Inhbc up inhibin beta-C
Kif20a down kinesin family member 20A
Lmnb1 down lamin B1
Lrp4 up low density lipoprotein receptor-related protein 4
Ly6a down lymphocyte antigen 6 complex, locus A
Matn3 up matrilin 3
Msc down musculin
Oasl1 up 2'–5' oligoadenylate synthetase-like 1
Pipox up pipecolic acid oxidase
Plk1 down polo-like kinase 1 (Drosophila)
Pnrc2 down proline-rich nuclear receptor coactivator 2
Polr3gl up polymerase (RNA) III (DNA directed) polypeptide G like
Prc1 down protein regulator of cytokinesis 1
Prom1 up prominin 1
Prr11 down proline rich 11
Psat1 down phosphoserine aminotransferase 1
Rlbp1 down retinaldehyde binding protein 1
Slc30a9 up solute carrier family 30 (zinc transporter), member 9
Snap91 up synaptosomal-associated protein 91
Socs2 up suppressor of cytokine signaling 2
Speer4d up spermatogenesis associated glutamate (E)-rich protein 4d
Spnb1 up spectrin beta 1
Syt10 down synaptotagmin X
Tax1bp1 up Tax1 (human T cell leukemia virus type I) binding protein 1
Tpm1 up tropomyosin 1, alpha
Ube2c down ubiquitin-conjugating enzyme E2C
Zfp28 down zinc finger protein 28
Zfp521 up zinc finger protein 521